RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TRIQKQ629K1 86 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 C5orf24Q7Z6I8 188 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 TOMM5Q8N4H5 51 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.28■□□□□ 0.2
USP53-203ENST00000507597 PRDM13Q9H4Q3 707 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 GAB2Q9UQC2 676 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 RBMX2Q9Y388 322 aaKnown RBP16.28■□□□□ 0.2
USP53-203ENST00000507597 HILPDAQ9Y5L2 63 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 DISC1C4P0D8 188 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 RAB3DO95716 219 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 NFYAP23511 347 aaPredicted RBP16.27■□□□□ 0.2
USP53-203ENST00000507597 ZNF134P52741 427 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 ZNF137PP52743 207 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 ZNF816Q0VGE8 651 aaPredicted RBP16.27■□□□□ 0.2
USP53-203ENST00000507597 STEAP1BQ6NZ63 245 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 LPCAT3Q6P1A2 487 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 DHRS11Q6UWP2 260 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 LHFPL4Q7Z7J7 247 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 TGIF2LXQ8IUE1 241 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 LYSMD2Q8IV50 215 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 ARRDC1Q8N5I2 433 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 OR5R1Q8NH85 324 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 SLC6A7Q99884 636 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 SRRQ9GZT4 340 aa16.27■□□□□ 0.2
USP53-203ENST00000507597 HSD17B6O14756 317 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 ST8SIA5O15466 376 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 LANCL1O43813 399 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 OR8U9P0C7N5 309 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 S100GP29377 79 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 RFX2P48378 723 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 RIPPLY3P57055 190 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 ZNF846Q147U1 533 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 ZNF79Q15937 498 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 Q6YL49 198 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 LDLRAD3Q86YD5 345 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 BCL6BQ8N143 479 aaPredicted RBP16.26■□□□□ 0.19
USP53-203ENST00000507597 TMEM86BQ8N661 226 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 OR8U1Q8NH10 309 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 SSMEM1Q8WWF3 244 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 NAV3Q8IVL0 2385 aa16.26■□□□□ 0.19
USP53-203ENST00000507597 ANKRD20A5PA0PJZ0 165 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 LY6LH3BQJ8 138 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 SLC31A2O15432 143 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 TCF21O43680 179 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 TUSC2O75896 110 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 CD74P04233 296 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 CD3DP04234 171 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 CD40LGP29965 261 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 ECI1P42126 302 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 DYNLT3P51808 116 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 BAMBIQ13145 260 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 LRRC75BQ2VPJ9 315 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 ZNF2Q9BSG1 426 aaPredicted RBP16.25■□□□□ 0.19
USP53-203ENST00000507597 CCDC32Q9BV29 185 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 ZNRD1Q9P1U0 126 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 PITPNC1Q9UKF7 332 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 POMT1Q9Y6A1 747 aa16.25■□□□□ 0.19
USP53-203ENST00000507597 CENPXA8MT69 81 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 PPYP01298 95 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 PPP5CP53041 499 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 TAGLNQ01995 201 aaKnown RBP16.24■□□□□ 0.19
USP53-203ENST00000507597 MSMO1Q15800 293 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 ZNF57Q68EA5 555 aaPredicted RBP16.24■□□□□ 0.19
USP53-203ENST00000507597 ZNF645Q8N7E2 425 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 SIGLECL1Q8N7X8 197 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 ZBTB34Q8NCN2 500 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 RTN4IP1Q8WWV3 396 aaPredicted RBP16.24■□□□□ 0.19
USP53-203ENST00000507597 ST6GALNAC6Q969X2 333 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 AGMATQ9BSE5 352 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 OR2D2Q9H210 308 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 IFI27L2Q9H2X8 130 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 AKIP1Q9NQ31 210 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 SCP2D1Q9UJQ7 156 aa16.24■□□□□ 0.19
USP53-203ENST00000507597 FAM53AQ6NSI3 398 aaPredicted RBP16.23■□□□□ 0.19
USP53-203ENST00000507597 MOB3BQ86TA1 216 aa16.23■□□□□ 0.19
USP53-203ENST00000507597 ABHD14BQ96IU4 210 aa16.23■□□□□ 0.19
USP53-203ENST00000507597 ADTRPQ96IZ2 230 aa16.23■□□□□ 0.19
USP53-203ENST00000507597 AKR1E2Q96JD6 320 aa16.23■□□□□ 0.19
USP53-203ENST00000507597 SSX3Q99909 188 aa16.23■□□□□ 0.19
USP53-203ENST00000507597 PRRT1Q99946 306 aa16.23■□□□□ 0.19
USP53-203ENST00000507597 RNF150Q9ULK6 438 aa16.23■□□□□ 0.19
USP53-203ENST00000507597 SAA2-SAA4A0A096LPE2 208 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 AMY2AP04746 511 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 FAM106CPP0CH98 169 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 SAA2P0DJI9 122 aaPredicted RBP16.22■□□□□ 0.19
USP53-203ENST00000507597 AADACP22760 399 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 CBX3Q13185 183 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 UTF1Q5T230 341 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 ZNF833PQ6ZTB9 187 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 SECTM1Q8WVN6 248 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 MOB3AQ96BX8 217 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 SCGB3A2Q96PL1 93 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 SLC5A7Q9GZV3 580 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 RAB18Q9NP72 206 aa16.22■□□□□ 0.19
USP53-203ENST00000507597 SONP18583 2426 aaKnown RBP16.21■□□□□ 0.19
USP53-203ENST00000507597 IGHV1-3A0A0C4DH29 117 aa16.21■□□□□ 0.19
USP53-203ENST00000507597 NAP1L6A6NFF2 107 aa16.21■□□□□ 0.19
USP53-203ENST00000507597 J3QRK9 145 aa16.21■□□□□ 0.19
USP53-203ENST00000507597 M0QYG6 137 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms