RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 FAM27D1Q5T7N8 215 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 DEGS2Q6QHC5 323 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 BTNL8Q6UX41 500 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 C12orf54Q6X4T0 127 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 ZNF841Q6ZN19 808 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 ETV3LQ6ZN32 361 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 C9orf139Q6ZV77 190 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 DOK3Q7L591 496 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 SLC16A9Q7RTY1 509 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-207ENST00000507401 HSD17B11Q8NBQ5 300 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 CSNK2A3Q8NEV1 391 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 OR8B3Q8NGG8 313 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 OR2G2Q8NGZ5 317 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 OR2AE1Q8NHA4 323 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 OTOSQ8NHW6 89 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 C14orf144Q96I85 54 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 OR14A2Q96R54 314 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 OR8B2Q96RD0 313 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 SLC6A7Q99884 636 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 ADAT1Q9BUB4 502 aaKnown RBP6.66□□□□□ -1.34
SCN1A-207ENST00000507401 ZMAT3Q9HA38 289 aaKnown RBP6.66□□□□□ -1.34
SCN1A-207ENST00000507401 ZNF391Q9UJN7 358 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 ANK2Q01484 3957 aa6.66□□□□□ -1.34
SCN1A-207ENST00000507401 TRAV38-1A0A0B4J264 116 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 IGHV3-64DA0A0J9YX35 117 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 C5orf63A6NC05 138 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 CLDN34H7C241 214 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 SLC17A2O00624 439 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 DVL1O14640 695 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 PAX4O43316 350 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 NDUFS6O75380 124 aaKnown RBP6.65□□□□□ -1.34
SCN1A-207ENST00000507401 ZNF205O95201 554 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 H2BFMP0C1H6 154 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 LINC00614P0C842 121 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 CD37P11049 281 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 GABRR1P24046 479 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 ACKR3P25106 362 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 CFHR2P36980 270 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 RBMXP38159 391 aaKnown RBP6.65□□□□□ -1.34
SCN1A-207ENST00000507401 EGR3Q06889 387 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 RAB11BQ15907 218 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 PRAMEF6Q5VXH4 476 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 WDR25Q64LD2 544 aaPredicted RBP6.65□□□□□ -1.34
SCN1A-207ENST00000507401 OR52W1Q6IF63 320 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 C11orf53Q8IXP5 236 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 ZFP82Q8N141 532 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 OR56B2PQ8NGI1 322 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 OR52B4Q8NGK2 314 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 OR6N2Q8NGY6 317 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 RNASEH2CQ8TDP1 164 aaKnown RBP6.65□□□□□ -1.34
SCN1A-207ENST00000507401 ASB17Q8WXJ9 295 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 MAFIPQ8WZ33 124 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 GCDHQ92947 438 aaPredicted RBP6.65□□□□□ -1.34
SCN1A-207ENST00000507401 SLAMF9Q96A28 289 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 RRNAD1Q96FB5 475 aaKnown RBP6.65□□□□□ -1.34
SCN1A-207ENST00000507401 REEP6Q96HR9 211 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 OR10A2Q9H208 303 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 OR51V1Q9H2C8 321 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 MED20Q9H944 212 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 RPS10P5Q9NQ39 176 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 C1orf123Q9NWV4 160 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 KAAG1Q9UBP8 84 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 CKLFQ9UBR5 152 aa6.65□□□□□ -1.34
SCN1A-207ENST00000507401 NBEAL1Q6ZS30 2694 aa6.65□□□□□ -1.35
SCN1A-207ENST00000507401 A0A087X0M5 115 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 hCG_38984A0A1B0GV85 526 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 A0A1B0GX30 115 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 C7orf77A4D0Y5 90 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 OOEPA6NGQ2 149 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 TRDCB7Z8K6 153 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 TCAPO15273 167 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 TSPAN15O95858 294 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 GRPP07492 148 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 SEC11BP0C7V7 166 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 METTL15P1P0C7V9 234 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 NQO2P16083 231 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 ALOX5APP20292 161 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 ANOS1P23352 680 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 PRTN3P24158 256 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 CHATP28329 748 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 NAA10P41227 235 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF121P58317 390 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-207ENST00000507401 IL13RA1P78552 427 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 ALKBH1Q13686 389 aaKnown RBP6.64□□□□□ -1.35
SCN1A-207ENST00000507401 KIAA0141Q14154 515 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-207ENST00000507401 OR8B8Q15620 311 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 C2orf68Q2NKX9 166 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 MOGAT2Q3SYC2 334 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 FAM201AQ5SY85 155 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 TEX36Q5VZQ5 186 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 KCTD18Q6PI47 426 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-207ENST00000507401 DHRS11Q6UWP2 260 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 LYPD2Q6UXB3 125 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 HEPN1Q6WQI6 88 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 FAM57BQ71RH2 274 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 SSX6Q7RTT6 188 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 GCSAMQ8N6F7 178 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 OR8S1Q8NH09 359 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 DCUN1D4Q92564 292 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms