RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SPANXN3Q5MJ09 141 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 ZNF684Q5T5D7 378 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 TXNDC8Q6A555 127 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 DMKNQ6E0U4 476 aaPredicted RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 SLC22A18ASQ8N1D0 253 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 OR1N2Q8NGR9 330 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 C8orf46Q8TAG6 207 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 MRAPQ8TCY5 172 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 TMEM54Q969K7 222 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 C18orf15Q96N68 181 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 NDFIP1Q9BT67 221 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 TSSK6Q9BXA6 273 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 SPRTNQ9H040 489 aaPredicted RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 KLK15Q9H2R5 256 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 CMC2Q9NRP2 79 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 OR2J3O76001 311 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 USF1P22415 310 aaPredicted RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 STC1P52823 247 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 SIRPAP78324 504 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 HLA-DRB3P79483 266 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 LCN2P80188 198 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 GAGE5Q13069 117 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 GAGE6Q13070 117 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 ZNF101Q8IZC7 436 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 OR5A2Q8NGI9 324 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 BAALCQ8WXS3 180 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 RASL10AQ92737 203 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 MAP1LC3CQ9BXW4 147 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 SLC35B3Q9H1N7 401 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 FBXL15Q9H469 300 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 ZDHHC6Q9H6R6 413 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 SLC2A6Q9UGQ3 507 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 NAT8BQ9UHF3 227 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 LAMA5O15230 3695 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 TRBV2A0A0J9YWF9 115 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 GXYLT2A0PJZ3 443 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 OR51F1A6NGY5 319 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 FAM90A26D6RGX4 464 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 KIR2DS3K7RE56 304 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 HSPB6O14558 160 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 CREBL2O60519 120 aaPredicted RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 CEACAM4O75871 244 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 MYOD1P15172 320 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 RPL4P36578 427 aaKnown RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 CKS1BP61024 79 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 RHOBP62745 196 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 PAFAH1B2P68402 229 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 H3F3AP84243 136 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 TNFAIP6P98066 277 aaPredicted RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 HSD52Q0P140 79 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 KIR2DS3Q14952 304 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 TNXAQ16473 311 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 POM121L1PQ3SYA9 428 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 FAM120AOSQ5T036 256 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 SFXN4Q6P4A7 337 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 OLIG3Q7RTU3 272 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 BCORP1Q8N888 145 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 THAP8Q8NA92 274 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 RNF183Q96D59 192 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 SEH1LQ96EE3 360 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 MTFP1Q9UDX5 166 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 CACNA1AO00555 2505 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 CFAP46Q8IYW2 2715 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 PSMB11A5LHX3 300 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 FBLL1A6NHQ2 334 aaKnown RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 FGF6P10767 208 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 DUSP1P28562 367 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 S100A7P31151 101 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 CNN1P51911 297 aaKnown RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 PSG9Q00887 426 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 SYT14P1Q58G82 188 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 GCSAMLQ5JQS6 135 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 BVES-AS1Q5T3Y7 98 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 RAET1LQ5VY80 246 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 LRRC70Q7Z2Q7 622 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 ZADH2Q8N4Q0 377 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 LRRC29Q8WV35 223 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 FGF14Q92915 247 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 PSMG3Q9BT73 122 aaPredicted RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 MRPL32Q9BYC8 188 aaKnown RBP1.89□□□□□ -2.11
NEDD4-205ENST00000506154 GPR84Q9NQS5 396 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 DLL3Q9NYJ7 618 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 CCDC167Q9P0B6 97 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 UQCR10Q9UDW1 63 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 PXMP4Q9Y6I8 212 aa1.89□□□□□ -2.11
NEDD4-205ENST00000506154 FAM231BA6NCW3 169 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 ANKRD30BLA7E2S9 258 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 FFAR1O14842 300 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 EFNA2O43921 213 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 FOXH1O75593 365 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 TOXO94900 526 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 LYPD3O95274 346 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 MT-CO3P00414 261 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 EPCAMP16422 314 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 LHX2P50458 406 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 MRPS34P82930 218 aaKnown RBP1.88□□□□□ -2.11
NEDD4-205ENST00000506154 HLA-BQ31612 363 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 TIGITQ495A1 244 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 RTL6Q6ICC9 239 aa1.88□□□□□ -2.11
NEDD4-205ENST00000506154 Q8N1Y9 231 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms