RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ODF4Q2M2E3 257 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 PAN3Q58A45 887 aaKnown RBP5.18□□□□□ -1.58
VCAN-206ENST00000505615 IGSF11Q5DX21 431 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 SLC35D3Q5M8T2 416 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 ZNF660Q6AZW8 331 aaPredicted RBP5.18□□□□□ -1.58
VCAN-206ENST00000505615 FAHD1Q6P587 224 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 RDH10Q8IZV5 341 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 NHLRC2Q8NBF2 726 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 NPBQ8NG41 125 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 UBALD1Q8TB05 177 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 ASB17Q8WXJ9 295 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 THRSPQ92748 146 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 ADAT3Q96EY9 351 aaPredicted RBP5.18□□□□□ -1.58
VCAN-206ENST00000505615 RIBC2Q9H4K1 309 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 SLA2Q9H6Q3 261 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 NDE1Q9NXR1 346 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 APLNQ9ULZ1 77 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 SLC45A2Q9UMX9 530 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 V9GYY5 206 aaPredicted RBP5.18□□□□□ -1.58
VCAN-206ENST00000505615 LOC102724200A0A096LPH7 203 aaPredicted RBP5.17□□□□□ -1.58
VCAN-206ENST00000505615 H0YJX3 145 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 TNFRSF11BO00300 401 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 SDCBPO00560 298 aaPredicted RBP5.17□□□□□ -1.58
VCAN-206ENST00000505615 FCN1O00602 326 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 SYT7O43581 403 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 SPRY2O43597 315 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 KRT36O76013 467 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 OR2A4O95047 310 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 TRGV3P03979 118 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 KIR2DS2P43631 304 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 CAMPP49913 170 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 MTCP1P56278 107 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 FAM3BP58499 235 aaPredicted RBP5.17□□□□□ -1.58
VCAN-206ENST00000505615 RPS7P62081 194 aaKnown RBP5.17□□□□□ -1.58
VCAN-206ENST00000505615 GAMTQ14353 236 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 DEFB135Q30KP9 77 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 DEFB114Q30KQ6 69 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 MOGAT2Q3SYC2 334 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 Q3ZCU0 254 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 AKIRIN2Q53H80 203 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 ACTBL2Q562R1 376 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 CT45A1Q5HYN5 189 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 UNQ5815/PRO19632Q6UWF5 114 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 CD300LDQ6UXZ3 194 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 PPP1R27Q86WC6 154 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 CDH26Q8IXH8 852 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 SPARTQ8N0X7 666 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 DRAXINQ8NBI3 349 aaPredicted RBP5.17□□□□□ -1.58
VCAN-206ENST00000505615 OR5D18Q8NGL1 313 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 CT45A3Q8NHU0 189 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 TEX47Q8TBZ9 253 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 RNF183Q96D59 192 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 NIPSNAP1Q9BPW8 284 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 ZNF251Q9BRH9 671 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 SIKE1Q9BRV8 207 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 FAM103A1Q9BTL3 118 aaKnown RBP5.17□□□□□ -1.58
VCAN-206ENST00000505615 MRPL20Q9BYC9 149 aaKnown RBP5.17□□□□□ -1.58
VCAN-206ENST00000505615 CTDSP1Q9GZU7 261 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 HRH4Q9H3N8 390 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 GORASP2Q9H8Y8 452 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 RHOFQ9HBH0 211 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 ZNF581Q9P0T4 197 aa5.17□□□□□ -1.58
VCAN-206ENST00000505615 LOC107986453A0A1B0GWG9 222 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 L7N2F9 121 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 DIRAS3O95661 229 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 ATF1P18846 271 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 EDN2P20800 178 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 PRKACBP22694 351 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 MAGEA2P43356 314 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 TCTAP57738 103 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 TIRAPP58753 221 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 NANOS2P60321 138 aaKnown RBP5.16□□□□□ -1.58
VCAN-206ENST00000505615 DEFA5Q01523 94 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 ZNF322Q6U7Q0 402 aaPredicted RBP5.16□□□□□ -1.58
VCAN-206ENST00000505615 TEPPQ6URK8 271 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 HACD2Q6Y1H2 254 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 Q6ZWC4 215 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 UTS2BQ765I0 119 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 SAXO1Q8IYX7 474 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 ZNF645Q8N7E2 425 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 LFNGQ8NES3 379 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 CNIH3Q8TBE1 160 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 PP6455Q8WZ26 134 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 ARL11Q969Q4 196 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 MCUR1Q96AQ8 359 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 C10orf35Q96D05 121 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 RDH12Q96NR8 316 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 OPALINQ96PE5 141 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 HOPXQ9BPY8 73 aaPredicted RBP5.16□□□□□ -1.58
VCAN-206ENST00000505615 FBXL15Q9H469 300 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 RAB21Q9UL25 225 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 ERGIC3Q9Y282 383 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 TMEM14AQ9Y6G1 99 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 NACAE9PAV3 2078 aa5.16□□□□□ -1.58
VCAN-206ENST00000505615 C13orf42A0A1B0GVH6 325 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 RRHO14718 337 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 MITFO75030 526 aaPredicted RBP5.15□□□□□ -1.59
VCAN-206ENST00000505615 RBMXL2O75526 392 aaKnown RBP5.15□□□□□ -1.59
VCAN-206ENST00000505615 SERPINA3P01011 423 aa5.15□□□□□ -1.59
VCAN-206ENST00000505615 CTRB1P17538 263 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms