RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 SULT4A1Q9BR01 284 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 NCOR1P1Q9H4R4 102 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 PLCXD1Q9NUJ7 323 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 TCRBV4S1A1TA0A5B7 111 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 PSMB11A5LHX3 300 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 TRIM64CA6NLI5 447 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 OOSP1A8MZH6 123 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 PTGES3LE9PB15 166 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 BOLA2-SMG1P6H3BVE0 249 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CCRL2O00421 344 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 HBZP02008 142 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 PF4V1P10720 104 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 SLC2A2P11168 524 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 CNTFRP26992 372 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CHATP28329 748 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 HOXD3P31249 432 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 PPP1CCP36873 323 aaKnown RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 MNDAP41218 407 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 BCAP31P51572 246 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 ZNF137PP52743 207 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 F2RL1P55085 397 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 TAS2R43P59537 309 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 KRTAP10-11P60412 298 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 RPS25P62851 125 aaKnown RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 SLC35A2P78381 396 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 ZNF816Q0VGE8 651 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 GPR50Q13585 617 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 IRF3Q14653 427 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 DEFB136Q30KP8 78 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 LIPKQ5VXJ0 399 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CCDC144NLQ6NUI1 221 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 SLC25A48Q6ZT89 311 aaKnown RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 C6orf201Q7Z4U5 140 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CENPVQ7Z7K6 275 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 MOB3BQ86TA1 216 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 IZUMO1Q8IYV9 350 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 OR8H3Q8N146 312 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 FAM71E2Q8N5Q1 922 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 Q8N9W7 124 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 OR4F17Q8NGA8 305 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 OR52L2PQ8NGH6 319 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 NTN5Q8WTR8 489 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 TMEM203Q969S6 136 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CREB3L1Q96BA8 519 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 AKR1E2Q96JD6 320 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 RITA1Q96K30 269 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 OR4F4Q96R69 305 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 HDHD3Q9BSH5 251 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 C8orf4Q9NR00 106 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 PLSCR3Q9NRY6 295 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 FAM30AQ9NZY2 134 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CKLFQ9UBR5 152 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 TRAPPC2LQ9UL33 140 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 AMMECR1Q9Y4X0 333 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 PEX16Q9Y5Y5 336 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 HUWE1Q7Z6Z7 4374 aaKnown RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 A0A087WXM4 84 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 WI2-2373I1.2A0A1W2PRP0 233 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 SERPINE3A8MV23 424 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 K7EIL1 84 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 FGF16O43320 207 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 ORC5O43913 435 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 ZNF780AO75290 641 aaPredicted RBP3.8□□□□□ -1.8
CDH9-203ENST00000505045 PDCD6O75340 191 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 IGHG2P01859 326 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 ELANEP08246 267 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 FAM106CPP0CH98 169 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 EGR2P11161 476 aaPredicted RBP3.8□□□□□ -1.8
CDH9-203ENST00000505045 MYF6P23409 242 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 HTR2CP28335 458 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 GPR12P47775 334 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 OR3A3P47888 321 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 RAB7AP51149 207 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 ARHGDIBP52566 201 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 CLDN12P56749 244 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 RPL23AP62750 156 aaKnown RBP3.8□□□□□ -1.8
CDH9-203ENST00000505045 QRFPP83859 136 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 EBI3Q14213 229 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 SPHARQ15513 63 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 MED22Q15528 200 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 KCTD21Q4G0X4 260 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 ACSM3Q53FZ2 586 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 RBM48Q5RL73 367 aaKnown RBP3.8□□□□□ -1.8
CDH9-203ENST00000505045 UNQ9370/PRO34162Q6UXP9 181 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 TMEM91Q6ZNR0 172 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 OR2W3Q7Z3T1 314 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 GPR141Q7Z602 305 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 STPG2Q8N412 459 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 LINC00311Q8N616 119 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 NKAIN3Q8N8D7 197 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 OR10A7Q8NGE5 316 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 OR4X2Q8NGF9 303 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 S100A13Q99584 98 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 MND1Q9BWT6 205 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 MRPL20Q9BYC9 149 aaKnown RBP3.8□□□□□ -1.8
CDH9-203ENST00000505045 TAF9BQ9HBM6 251 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 PALMDQ9NP74 551 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 GNG12Q9UBI6 72 aa3.8□□□□□ -1.8
CDH9-203ENST00000505045 TSSC4Q9Y5U2 329 aaPredicted RBP3.8□□□□□ -1.8
CDH9-203ENST00000505045 TNCP24821 2201 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms