RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 H1FOOQ8IZA3 346 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 LYG1Q8N1E2 194 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 FAM216AQ8WUB2 273 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 GCDHQ92947 438 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 SNAPC3Q92966 411 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 DUX5Q96PT3 197 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 SOSTQ9BQB4 213 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 GINS4Q9BRT9 223 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 AGMATQ9BSE5 352 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 PARP12Q9H0J9 701 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 C11orf54Q9H0W9 315 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 IFI27L2Q9H2X8 130 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 IFT46Q9NQC8 304 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 BATF3Q9NR55 127 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 RDH8Q9NYR8 311 aa9.59□□□□□ -0.87
PDLIM5-208ENST00000504489 A0A1W2PPI3 338 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 HSD17B6O14756 317 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 CTDSPLO15194 276 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 TXNL1O43396 289 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 LANCL1O43813 399 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 BRS3P32247 399 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 S100A5P33763 92 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 MRPS10P82664 201 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 DIAPH2-AS1Q14236 149 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 PLA1AQ53H76 456 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 PYHIN1Q6K0P9 492 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 C16orf87Q6PH81 154 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 OR5AP2Q8NGF4 316 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 RTN4IP1Q8WWV3 396 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 CHIAQ9BZP6 476 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 ABCB10Q9NRK6 738 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 PIPOXQ9P0Z9 390 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 VPREB3Q9UKI3 123 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 PLXNB1O43157 2135 aa9.58□□□□□ -0.88
PDLIM5-208ENST00000504489 IGHV1-3A0A0C4DH29 117 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 FABP12A6NFH5 140 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 FAM90A9PA6NNJ1 464 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 GABARAPH6UMI1 98 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 RAB29O14966 203 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 RCVRNP35243 200 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 RAB13P51153 203 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 TAS2R46P59540 309 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 ARPC4P59998 168 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 RPL15P61313 204 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 SRSF2Q01130 221 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 IL18Q14116 193 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 HABP2Q14520 560 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 KRTAP21-3Q3LHN1 58 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 FAM71F2Q6NXP2 309 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 ZNF833PQ6ZTB9 187 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 THNSL2Q86YJ6 484 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 TGIF2LXQ8IUE1 241 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 LYSMD2Q8IV50 215 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 OR52I2Q8NH67 350 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 FCAMRQ8WWV6 532 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 CFHR4Q92496 578 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 ZNF251Q9BRH9 671 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 NECAP2Q9NVZ3 263 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 MTFP1Q9UDX5 166 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 GAB2Q9UQC2 676 aa9.57□□□□□ -0.88
PDLIM5-208ENST00000504489 SAA2-SAA4A0A096LPE2 208 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 A6NDX4 124 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 TIMM23O14925 209 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 RBBP9O75884 186 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 TUSC2O75896 110 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 FCER2P06734 321 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 OR8U9P0C7N5 309 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 SAA2P0DJI9 122 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 OR5H8P0DN80 308 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 OR3A3P47888 321 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 SSBP1Q04837 148 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 CDK10Q15131 360 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 CCDC190Q86UF4 302 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 DRAM1Q8N682 238 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 OR6Q1Q8NGQ2 317 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 OR8U1Q8NH10 309 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 ABHD14BQ96IU4 210 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 S1PR3Q99500 378 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 TNFRSF19Q9NS68 423 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 ZNF221Q9UK13 617 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 PITPNC1Q9UKF7 332 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 TCF19Q9Y242 345 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 OR2W1Q9Y3N9 320 aa9.56□□□□□ -0.88
PDLIM5-208ENST00000504489 GPR137BO60478 399 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 NFYAP23511 347 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 PTBP1P26599 531 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 CD1BP29016 333 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 ETV6P41212 452 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 GPR12P47775 334 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 REG1BP48304 166 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 LUMP51884 338 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 ACTBP60709 375 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 ACTG1P63261 375 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 DGCR2P98153 550 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 DYRK1AQ13627 763 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 LY6EQ16553 131 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 KRTAP24-1Q3LI83 254 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 OVCH2Q7RTZ1 564 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 MOB3BQ86TA1 216 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms