RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 RIMS2Q9UQ26 1411 aa2.41□□□□□ -2.02
TRAPPC13-205ENST00000504243 NUP205Q92621 2012 aa2.41□□□□□ -2.02
TRAPPC13-205ENST00000504243 SMARCA2P51531 1590 aa2.4□□□□□ -2.02
TRAPPC13-205ENST00000504243 CHD2O14647 1828 aaKnown RBP2.4□□□□□ -2.02
TRAPPC13-205ENST00000504243 RAB3GAP2Q9H2M9 1393 aa2.4□□□□□ -2.02
TRAPPC13-205ENST00000504243 LOC105371267A0A1B0GV96 52 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 GNG14A0A1W2PPG7 69 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 EFCAB10A6NFE3 127 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 C2orf74A8MZ97 194 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 B4DEV8 164 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 C8orf87E5RJ46 101 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 F5H5T6 163 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 SH2D1AO60880 128 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 UGT2B7P16662 529 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 PSMA1P25786 263 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 GNG10P50151 68 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 GABARAPL2P60520 117 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 MEF2BQ02080 365 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 MGAT3Q09327 533 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 APOFQ13790 326 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 PDK2Q15119 407 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 MMDQ15546 238 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 CST6Q15828 149 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 HCP5Q6MZN7 132 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 TMPPEQ6ZT21 453 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 CCDC121Q6ZUS5 278 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 MSRB3Q8IXL7 192 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 OR8K1Q8NGG5 319 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 OR11L1Q8NGX0 322 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 FAM172AQ8WUF8 416 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 KCTD4Q8WVF5 259 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 PTH2Q96A98 100 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 SMIM19Q96E16 107 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 CCDC42Q96M95 316 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 RBP7Q96R05 134 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 PRSS27Q9BQR3 290 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 TRIM4Q9C037 500 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 OR51B6Q9H340 312 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 FGFR1OP2Q9NVK5 253 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 SLC23A2Q9UGH3 650 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 NACADO15069 1562 aa2.4□□□□□ -2.03
TRAPPC13-205ENST00000504243 SCRIBQ14160 1630 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 ROCK2O75116 1388 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 C21orf140B9A014 251 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 F5H5K5 113 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 CCRL2O00421 344 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 ACOX3O15254 700 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 TGOLN2O43493 480 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 CTSGP08311 255 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 C8orf88P0DMB2 117 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 OR12D1P0DN82 309 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 CD36P16671 472 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 F8A1P23610 371 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 CRABP1P29762 137 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 MAGEA12P43365 314 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 INPP1P49441 399 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 CXCR4P61073 352 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 SKP2Q13309 424 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 SMCO1Q147U7 214 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 PAFAH1B3Q15102 231 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 HLA-DRB5Q30154 266 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 CCDC58Q4VC31 144 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 NOXRED1Q6NXP6 359 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 DNM1P34Q6PK57 102 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 XKRXQ6PP77 449 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 FAM19A5Q7Z5A7 132 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 LRP11Q86VZ4 500 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 LYPD6Q86Y78 171 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 ZBTB8OSQ8IWT0 167 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 KRTCAP2Q8N6L1 136 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 OR4P4Q8NGL7 312 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 AP3S1Q92572 193 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 KCTD7Q96MP8 289 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 TMEM208Q9BTX3 173 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 CDCA4Q9BXL8 241 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 SLC2A9Q9NRM0 540 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 MRPL16Q9NX20 251 aaKnown RBP2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 BABAM2Q9NXR7 383 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 TP53TG1Q9Y2A0 90 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 ARL2BPQ9Y2Y0 163 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 ZNF337Q9Y3M9 751 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 ZNF532Q9HCE3 1301 aa2.39□□□□□ -2.03
TRAPPC13-205ENST00000504243 KIF24Q5T7B8 1368 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 IGKV1D-37A0A075B6S9 117 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 FUOMA2VDF0 154 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 TMEM250H0YL14 139 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 CXCR6O00574 342 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 SSNA1O43805 119 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 G0S2P27469 103 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 CAPZBP47756 277 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 OMPP47874 163 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 GZMMP51124 257 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 AP2S1P53680 142 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 SPCS3P61009 180 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 CCL7P80098 99 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 LRRC26Q2I0M4 334 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 TMED4Q7Z7H5 227 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 NIT1Q86X76 327 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 MUC15Q8N387 334 aa2.38□□□□□ -2.03
TRAPPC13-205ENST00000504243 LMX1AQ8TE12 382 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms