RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SHPKQ9UHJ6 478 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 SMPXQ9UHP9 88 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 POMPQ9Y244 141 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 RNF11Q9Y3C5 154 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 FAM32AQ9Y421 112 aaKnown RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 GCN1Q92616 2671 aaKnown RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 COL27A1Q8IZC6 1860 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 PTPRQQ9UMZ3 2332 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 AHCTF1Q8WYP5 2266 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 NYNRINQ9P2P1 1898 aaKnown RBP3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 COL5A1P20908 1838 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 TRAV39A0A0B4J263 110 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 CIB4A0PJX0 185 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 PMS2P5A8MQ11 134 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 UBFD1O14562 309 aaKnown RBP3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 DHRS3O75911 302 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 DHFRP00374 187 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 PDYNP01213 254 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 CSF3P09919 207 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 CD99P14209 185 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 IL1RNP18510 177 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 TCN2P20062 427 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 HTR1EP28566 365 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 CHRNB4P30926 498 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 REG1BP48304 166 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 LPAL2Q16609 132 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 LRRC36Q1X8D7 754 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 PYCR3Q53H96 274 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 ADAMTSL4-AS1Q5T5F5 129 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 LEMD1Q68G75 181 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 KDM4DQ6B0I6 523 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 GLYATQ6IB77 296 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 NANOGP8Q6NSW7 305 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 CGB2Q6NT52 195 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 Q6ZSR6 202 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 TMEM144Q7Z5S9 345 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 LINC00471Q8N535 108 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 FAM71E2Q8N5Q1 922 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 PACRGLQ8N7B6 248 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR52E4Q8NGH9 312 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR51S1Q8NGJ8 323 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 DNAJC9Q8WXX5 260 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 YIPF5Q969M3 257 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 CPNE2Q96FN4 548 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 BMFQ96LC9 184 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 METTL26Q96S19 204 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 TMED9Q9BVK6 235 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 NANOGQ9H9S0 305 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 MYOZ1Q9NP98 299 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 ARMC1Q9NVT9 282 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 AIG1Q9NVV5 245 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 DNAJC27Q9NZQ0 273 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 ENOPH1Q9UHY7 261 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 TP53TG5Q9Y2B4 290 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 SLC25A15Q9Y619 301 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 PRSS21Q9Y6M0 314 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF780BQ9Y6R6 833 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 U3KQA8 63 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 PIEZO2Q9H5I5 2752 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF462Q96JM2 2506 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 NBPF19A0A087WUL8 3843 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 THADAQ6YHU6 1953 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 RAI1Q7Z5J4 1906 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 TENM4Q6N022 2769 aa3.29□□□□□ -1.88
HMGB1P21-201ENST00000502313 ASXL3Q9C0F0 2248 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 FLNBO75369 2602 aaKnown RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 DOCK9Q9BZ29 2069 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 TRAV9-2A0A087WT02 112 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 SMIM26A0A096LP01 95 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 A0A096LPI6 279 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 A0A1B0GUV1 79 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 C5orf58C9J3I9 102 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF878C9JN71 531 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 H0Y9J4 135 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 PHYHO14832 338 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 CHP2O43745 196 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 REM1O75628 298 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 SOD1P00441 154 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ERGP11308 486 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 GABRA1P14867 456 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 RPL5P46777 297 aaKnown RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 PPOXP50336 477 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 VSX2P58304 361 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 TAS2R41P59536 307 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 TAS2R46P59540 309 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ESRRGP62508 458 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 KIAA0087Q14695 138 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 RSU1Q15404 277 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 TOMM34Q15785 309 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 CDNFQ49AH0 187 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 NHLRC3Q5JS37 347 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF506Q5JVG8 444 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 CLEC12AQ5QGZ9 265 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 FAM182AQ5T1J6 154 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR10K2Q6IF99 312 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 TEX43Q6ZNM6 134 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 NR2C2APQ86WQ0 139 aa3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 LRRC25Q8N386 305 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P21-201ENST00000502313 SLC25A45Q8N413 288 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms