RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 SPANXN5Q5MJ07 72 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 FIP1L1Q6UN15 594 aaKnown RBP8.28□□□□□ -1.08
CLIP1-204ENST00000501271 LILRB2Q8N423 598 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF808Q8N4W9 903 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-204ENST00000501271 SCGB1C1Q8TD33 95 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 GALMQ96C23 342 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 MUCL1Q96DR8 90 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 KCNIP1Q9NZI2 227 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 HEATR1Q9H583 2144 aaKnown RBP8.27□□□□□ -1.08
CLIP1-204ENST00000501271 RNF212BA8MTL3 300 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 PPIHO43447 177 aaKnown RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 HBZP02008 142 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 S100A6P06703 90 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 MAS1LP35410 378 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 RAB2AP61019 212 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 UBE2KP61086 200 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 DLK1P80370 383 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 FOXF2Q12947 444 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 EIF4EBP1Q13541 118 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 LRRC75BQ2VPJ9 315 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 KHDC3LQ587J8 217 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 WDR82Q6UXN9 313 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 RBMS3Q6XE24 437 aaKnown RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 ACP7Q6ZNF0 438 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 ZNF429Q86V71 674 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 MALSU1Q96EH3 234 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 ZNF665Q9H7R5 613 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 UFSP2Q9NUQ7 469 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 GNG13Q9P2W3 67 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 METRNQ9UJH8 293 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 MMP24Q9Y5R2 645 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 CACNA1HO95180 2353 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 OOEPA6NGQ2 149 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 PTBP3O95758 552 aaKnown RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 CECR9P0C854 216 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 P0C879 139 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 HOXC12P31275 282 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 IL2RGP31785 369 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 G6PCP35575 357 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 TAGLN2P37802 199 aaKnown RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 FGF8P55075 233 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 BRWD1-AS2P59051 145 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 HBG1P69891 147 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 HBG2P69892 147 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 TNFRSF9Q07011 255 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 ZNF816Q0VGE8 651 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 ZNF787Q6DD87 383 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 SLC35E4Q6ICL7 350 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 LCN15Q6UWW0 184 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 HEPN1Q6WQI6 88 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 TPRX1Q8N7U7 411 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 MRGPRDQ8TDS7 321 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 RCC1LQ96I51 464 aaKnown RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 PSMG3Q9BT73 122 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 WDR61Q9GZS3 305 aaKnown RBP8.27□□□□□ -1.09
CLIP1-204ENST00000501271 RBKSQ9H477 322 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 MSL2Q9HCI7 577 aa8.27□□□□□ -1.09
CLIP1-204ENST00000501271 SVILO95425 2214 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-204ENST00000501271 UBE2L5PA0A1B0GUS4 154 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 ZFP92A6NM28 416 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 TIMM8AO60220 97 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-204ENST00000501271 S1PR2O95136 353 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 KRASP01116 189 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 SSTR5P35346 364 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 PLA2G5P39877 138 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 GABRA2P47869 451 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 ZNF343Q6P1L6 599 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 BTNL3Q6UXE8 466 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 OR4C12Q96R67 309 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 CXXC4Q9H2H0 198 aa8.26□□□□□ -1.09
CLIP1-204ENST00000501271 FAM90A26D6RGX4 464 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 AQP7O14520 342 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 CLDN1O95832 211 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 IGHV2-5P01817 119 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 OR8U8P0C7N1 319 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 BCL2P10415 239 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 CD82P27701 267 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 GLIPR1P48060 266 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 FABP6P51161 128 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 ELLP55199 621 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-204ENST00000501271 SLC38A11Q08AI6 406 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 FABP9Q0Z7S8 132 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 FAM90A2PQ658T7 463 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 OR8G2PQ6IF36 304 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 TMEM14EPQ6UXP3 125 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 TVP23CQ96ET8 276 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 NIPSNAP3BQ9BS92 247 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 HSPB7Q9UBY9 170 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 A0A087WWC5 75 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 IGHV3-43A0A0B4J1X8 118 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 SPAARA0A1B0GVQ0 90 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 ODAMA1E959 279 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 C17orf98A8MV24 154 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 IGHV3-43DP0DP04 118 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 HOXB1P14653 301 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-204ENST00000501271 KITLGP21583 273 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 LINC00205P59089 165 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 COL10A1Q03692 680 aa8.25□□□□□ -1.09
CLIP1-204ENST00000501271 FAM180AQ6UWF9 173 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms