RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SLC38A6Q8IZM9 456 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 C12orf45Q8N5I9 185 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 CLRN3Q8NCR9 226 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF680Q8NEM1 530 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 TMEM185AQ8NFB2 350 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 OR5D13Q8NGL4 314 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 OR4A4PQ8NGN8 299 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 LILRB1Q8NHL6 650 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 MRPL30Q8TCC3 161 aaKnown RBP4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 MARCH1Q8TCQ1 289 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 ASB13Q8WXK3 278 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 DYRK2Q92630 601 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 PIK3IP1Q96FE7 263 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SNX22Q96L94 193 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SEC22CQ9BRL7 303 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 WDR13Q9H1Z4 485 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 RAB9BQ9NP90 201 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 DYNLRB1Q9NP97 96 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF581Q9P0T4 197 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 IL36RNQ9UBH0 155 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 UBQLN2Q9UHD9 624 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC23A1Q9UHI7 598 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF222Q9UK12 451 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 TRAPPC2LQ9UL33 140 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 PPP1R3CQ9UQK1 317 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 VSIG4Q9Y279 399 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SESN1Q9Y6P5 492 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 BIRC6Q9NR09 4857 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 IGKV1D-8A0A087WSZ0 117 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 MEIKINA0A087WXM9 373 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 TRAV38-1A0A0B4J264 116 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 A0A0B4J2A0 478 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 A0A1B0GW55 424 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OOEPA6NGQ2 149 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OR5H14A6NHG9 310 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OR2AT4A6NND4 320 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 KRBOX1C9JBD0 128 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 HSPB6O14558 160 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 MGST3O14880 152 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 SCGB1D2O95969 90 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 HLA-AP01891 365 aaKnown RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DUX4L2P0CJ85 424 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DUX4L3P0CJ86 424 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DUX4L4P0CJ87 422 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DUX4L5P0CJ88 424 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DUX4L6P0CJ89 424 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DUX4L7P0CJ90 424 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 RRASP10301 218 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 MUC1P15941 1255 aaPredicted RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 GZMHP20718 246 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 ZBTB25P24278 435 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 CD34P28906 385 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 S100GP29377 79 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 FCGR2CP31995 323 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 GABRA2P47869 451 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 SNRPD2P62316 118 aaKnown RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 HLA-DRB3P79483 266 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 CCL8P80075 99 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DHODHQ02127 395 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 TFF3Q07654 80 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DHRS2Q13268 280 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DAZAP2Q15038 168 aaPredicted RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF672Q499Z4 452 aaPredicted RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 ABCA11PQ4W5N1 156 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 AADACL3Q5VUY0 350 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 COMMD7Q86VX2 200 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 SGPP2Q8IWX5 399 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 FAM185AQ8N0U4 392 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OR8H3Q8N146 312 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 GAPTQ8N292 157 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 MUC20Q8N307 709 aaPredicted RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 MUC15Q8N387 334 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF561Q8N587 486 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 GCSAMQ8N6F7 178 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF565Q8N9K5 539 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 CCDC71LQ8N9Z2 235 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 UXS1Q8NBZ7 420 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OR2AK2Q8NG84 335 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OR5T2Q8NGG2 359 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OR52B4Q8NGK2 314 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OR10J5Q8NHC4 309 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 COQ8AQ8NI60 647 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 FAM222BQ8WU58 562 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 TOMM40LQ969M1 308 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 MOB3AQ96BX8 217 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 PHB2Q99623 299 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 VRK1Q99986 396 aaPredicted RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 RTBDNQ9BSG5 229 aaPredicted RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 TMEM204Q9BSN7 226 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF436Q9C0F3 470 aaPredicted RBP4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 NCOR1P1Q9H4R4 102 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 NARFLQ9H6Q4 476 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 ZNF665Q9H7R5 613 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 SAP30LQ9HAJ7 183 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 MGAT4CQ9UBM8 478 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 DUX4Q9UBX2 424 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 SHPKQ9UHJ6 478 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 OPN4Q9UHM6 478 aa4.4□□□□□ -1.71
HMGXB4-208ENST00000498325 MAB21L2Q9Y586 359 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms