RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 PRRG2O14669 202 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 TNFSF12O43508 249 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 OR2C1O95371 312 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 OR2H2O95918 312 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 SPTA1P02549 2419 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 PGA5P0DJD9 388 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 PSG2P11465 335 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 UBE2NP61088 152 aaKnown RBP10.48□□□□□ -0.73
AFF3-215ENST00000498090 SNRPEP62304 92 aaKnown RBP10.48□□□□□ -0.73
AFF3-215ENST00000498090 ZNF154Q13106 437 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 VWA1Q6PCB0 445 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 ETV3LQ6ZN32 361 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 FAM214BQ7L5A3 538 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 TCTEX1D1Q8N7M0 179 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 ST6GALNAC3Q8NDV1 305 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 OR51H1Q8NH63 302 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 CLDND2Q8NHS1 167 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 RARRES2Q99969 163 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 NIPSNAP3BQ9BS92 247 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 KCNIP1Q9NZI2 227 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 PUS1Q9Y606 427 aaKnown RBP eCLIP10.48□□□□□ -0.73
AFF3-215ENST00000498090 A0A1W2PPH5 198 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 A6NLC8 198 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 SMPD2O60906 423 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 NDUFS6O75380 124 aaKnown RBP10.47□□□□□ -0.73
AFF3-215ENST00000498090 TNFSF13O75888 250 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 AKR1C3P42330 323 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 PPP1CBP62140 327 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
AFF3-215ENST00000498090 PMS2P11Q13670 270 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 ICAM4Q14773 271 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 TESK1Q15569 626 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 SCCPDHQ8NBX0 429 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 MBD3L1Q8WWY6 194 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 IL1F10Q8WWZ1 152 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 TVP23CQ96ET8 276 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 ZNF488Q96MN9 340 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 P2RX4Q99571 388 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 TOLLIPQ9H0E2 274 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 SH3BGRL2Q9UJC5 107 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 RBM7Q9Y580 266 aaKnown RBP10.47□□□□□ -0.73
AFF3-215ENST00000498090 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.47□□□□□ -0.73
AFF3-215ENST00000498090 RHBDL1O75783 438 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 EIF3GO75821 320 aaKnown RBP eCLIP10.47□□□□□ -0.73
AFF3-215ENST00000498090 EPHA1P21709 976 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 TIMP3P35625 211 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 UBE2KP61086 200 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 RPS23P62266 143 aaKnown RBP10.47□□□□□ -0.73
AFF3-215ENST00000498090 CCL20P78556 96 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 RBPJQ06330 500 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 HEPN1Q6WQI6 88 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 ZNF429Q86V71 674 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 FAM24BQ8N5W8 94 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 CNEP1R1Q8N9A8 125 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 TCTEX1D2Q8WW35 142 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 C20orf24Q9BUV8 137 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 PSENENQ9NZ42 101 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 CISD1Q9NZ45 108 aaKnown RBP10.47□□□□□ -0.73
AFF3-215ENST00000498090 CACNG5Q9UF02 275 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 TIMM9Q9Y5J7 89 aa10.47□□□□□ -0.73
AFF3-215ENST00000498090 A0A0G2JRQ6 117 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 LOC102723971A0A1B0GUV8 181 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 TMEM30CPA0ZSE6 113 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 PCP4L1A6NKN8 68 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 AP4M1O00189 453 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 PPIHO43447 177 aaKnown RBP10.46□□□□□ -0.74
AFF3-215ENST00000498090 TGOLN2O43493 480 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 LILRA1O75019 489 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 NXPH2O95156 264 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 IFNA1P01562 189 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 IGLV2-14P01704 120 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 IGHV2-5P01817 119 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 CEACAM8P31997 349 aaPredicted RBP10.46□□□□□ -0.74
AFF3-215ENST00000498090 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.74
AFF3-215ENST00000498090 CTAG1AP78358 180 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 ATP6V1FQ16864 119 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 LRRC75BQ2VPJ9 315 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 THNSL2Q86YJ6 484 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 C1orf174Q8IYL3 243 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 C17orf78Q8N4C9 275 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 FAM216AQ8WUB2 273 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 ISOC2Q96AB3 205 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 MUCL1Q96DR8 90 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 HES4Q9HCC6 221 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 TMEM242Q9NWH2 141 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 OR1A1Q9P1Q5 309 aa10.46□□□□□ -0.74
AFF3-215ENST00000498090 SHANK1Q9Y566 2161 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 A0A1W2PPE2 198 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 LY86O95711 162 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 CGAP01215 116 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 RUNX1Q01196 453 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 HAGHQ16775 308 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 SLC35E4Q6ICL7 350 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 ZNF525Q8N782 197 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 ZNF645Q8N7E2 425 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 C1orf162Q8NEQ5 155 aaPredicted RBP10.45□□□□□ -0.74
AFF3-215ENST00000498090 RAB39BQ96DA2 213 aa10.45□□□□□ -0.74
AFF3-215ENST00000498090 STARD4Q96DR4 205 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms