RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 ELK4P28324 431 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 ALDH3A1P30838 453 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 UBE2AP49459 152 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 DEFA1P59665 94 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 APOFQ13790 326 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 ARHGAP11BQ3KRB8 267 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 C3orf33Q6P1S2 294 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 GUSBP11Q6P575 273 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 UNQ9165/PRO28630Q6UXU0 137 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 FA2HQ7L5A8 372 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 PDPNQ86YL7 162 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 UBL4BQ8N7F7 174 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 OR52L1Q8NGH7 329 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 CIRBP-AS1Q8TBR5 109 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 SLC25A44Q96H78 314 aaPredicted RBP3.05□□□□□ -1.92
SNX13-211ENST00000496855 CMSS1Q9BQ75 279 aaKnown RBP3.05□□□□□ -1.92
SNX13-211ENST00000496855 TSSK6Q9BXA6 273 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 TBL1XR1Q9BZK7 514 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 TRIM4Q9C037 500 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 MIXL1Q9H2W2 232 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 OR51I2Q9H344 312 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 HES4Q9HCC6 221 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 SS18L2Q9UHA2 77 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 UTP11Q9Y3A2 253 aaKnown RBP3.05□□□□□ -1.92
SNX13-211ENST00000496855 CEP164Q9UPV0 1460 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 CDC42BPBQ9Y5S2 1711 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 NCOA1Q15788 1441 aa3.05□□□□□ -1.92
SNX13-211ENST00000496855 IGLV11-55A0A075B6I3 123 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 C5orf49A4QMS7 147 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 OR11H12B2RN74 326 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 C11orf94C9JXX5 98 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 COPEO14579 308 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 MRASO14807 208 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 S1PR2O95136 353 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 IGHV1-8P0DP01 117 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 DDTP30046 118 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 RAP1AP62834 184 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 HERVK_113P63121 156 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 TFAMQ00059 246 aaKnown RBP3.04□□□□□ -1.92
SNX13-211ENST00000496855 EBPQ15125 230 aaKnown RBP3.04□□□□□ -1.92
SNX13-211ENST00000496855 FAM78BQ5VT40 261 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 EBLN2Q6P2I7 272 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 SBSNQ6UWP8 590 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 OR11H1Q8NG94 326 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 OR11H2Q8NH07 326 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 MAL2Q969L2 176 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 DCUN1D1Q96GG9 259 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 REEP6Q96HR9 211 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 TBX5Q99593 518 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 MS4A8Q9BY19 250 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 ZNF331Q9NQX6 463 aaPredicted RBP3.04□□□□□ -1.92
SNX13-211ENST00000496855 TMEM38BQ9NVV0 291 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 ZNF492Q9P255 531 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 ANGPT4Q9Y264 503 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 SLC35A3Q9Y2D2 325 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 PCYT1BQ9Y5K3 369 aaPredicted RBP3.04□□□□□ -1.92
SNX13-211ENST00000496855 OR51B4Q9Y5P0 310 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 CHD1O14646 1710 aa3.04□□□□□ -1.92
SNX13-211ENST00000496855 ZNFX1Q9P2E3 1918 aaKnown RBP3.03□□□□□ -1.92
SNX13-211ENST00000496855 BAZ2AQ9UIF9 1905 aaKnown RBP3.03□□□□□ -1.92
SNX13-211ENST00000496855 PLXNB3Q9ULL4 1909 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 APCSP02743 223 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 SCGB1C2P0DMR2 95 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 GTF2F2P13984 249 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 ORM2P19652 201 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 DAPP51397 102 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 CCR6P51684 374 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 ESRRGP62508 458 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 LOXL1Q08397 574 aaPredicted RBP3.03□□□□□ -1.92
SNX13-211ENST00000496855 MPPED2Q15777 294 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 TEX36Q5VZQ5 186 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 LAIR2Q6ISS4 152 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 TCF23Q7RTU1 214 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 DAZ4Q86SG3 579 aaKnown RBP3.03□□□□□ -1.92
SNX13-211ENST00000496855 NATD1Q8N6N6 113 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 ZNF433Q8N7K0 673 aaPredicted RBP3.03□□□□□ -1.92
SNX13-211ENST00000496855 COQ8AQ8NI60 647 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 SCGB1C1Q8TD33 95 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 ANKRD36BP1Q96IX9 119 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 BTF3L4Q96K17 158 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 MARVELD1Q9BSK0 173 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 KIFC1Q9BW19 673 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 GTSF1LQ9H1H1 148 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 DAZ1Q9NQZ3 744 aaKnown RBP3.03□□□□□ -1.92
SNX13-211ENST00000496855 NUFIP1Q9UHK0 495 aaKnown RBP3.03□□□□□ -1.92
SNX13-211ENST00000496855 COQ4Q9Y3A0 265 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 CARMIL3Q8ND23 1372 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 GTF3C1Q12789 2109 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 NAV1Q8NEY1 1877 aa3.03□□□□□ -1.92
SNX13-211ENST00000496855 IGHV7-4-1A0A0J9YVY3 117 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 F5H5P2 479 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 M0R381 172 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 CHST10O43529 356 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 MFSD11O43934 449 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 CCNE2O96020 404 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 C1QBP02746 253 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 HMGN1P05114 100 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 OR12D1P0DN82 309 aa3.03□□□□□ -1.93
SNX13-211ENST00000496855 NELFEP18615 380 aaKnown RBP3.03□□□□□ -1.93
SNX13-211ENST00000496855 S100A2P29034 98 aa3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms