RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 RITA1Q96K30 269 aa12.77□□□□□ -0.37
DNMT3A-215ENST00000496570 CABLES2Q9BTV7 478 aa12.77□□□□□ -0.37
DNMT3A-215ENST00000496570 C11orf54Q9H0W9 315 aaPredicted RBP12.77□□□□□ -0.37
DNMT3A-215ENST00000496570 LINC01548A6NM66 108 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 FABP7O15540 132 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 FBXO24O75426 580 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 GSTT2P0CG29 244 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 GSTT2BP0CG30 244 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 RPS19P39019 145 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 SCAND1P57086 179 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 ZNF260Q3ZCT1 412 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 IGSF11Q5DX21 431 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 IDNKQ5T6J7 187 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 Q6ZS49 121 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 FAM71E2Q8N5Q1 922 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 OR4A4PQ8NGN8 299 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 OR13F1Q8NGS4 319 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 ABHD14BQ96IU4 210 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 CITED2Q99967 270 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 VCX3AQ9NNX9 186 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 RHBDL2Q9NX52 303 aa12.76□□□□□ -0.37
DNMT3A-215ENST00000496570 SSX5O60225 188 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 IGHG2P01859 326 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 CT45A6P0DMU7 189 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 CT45A5P0DMU8 189 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 CT45A7P0DMV0 189 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 LSM3P62310 102 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 CD83Q01151 205 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 SRSF7Q16629 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 C2orf68Q2NKX9 166 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 TIMM50Q3ZCQ8 353 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 ARSJQ5FYB0 599 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 C9orf152Q5JTZ5 239 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 HACD4Q5VWC8 232 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 FAM71F2Q6NXP2 309 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 OR5AU1Q8NGC0 362 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 S1PR3Q99500 378 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 FUNDC2Q9BWH2 189 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 MMP27Q9H306 513 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 RDH8Q9NYR8 311 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 PIPOXQ9P0Z9 390 aa12.75□□□□□ -0.37
DNMT3A-215ENST00000496570 TRBV6-7A0A0A0MS04 114 aa12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 TMEM235A6NFC5 223 aa12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 RAB29O14966 203 aa12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 CNTFRP26992 372 aa12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 NUDCD2Q8WVJ2 157 aa12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 C5orf30Q96GV9 206 aa12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 NOL4LQ96MY1 436 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 ABCG5Q9H222 651 aa12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 LIN7CQ9NUP9 197 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 ETV7Q9Y603 341 aa12.74□□□□□ -0.37
DNMT3A-215ENST00000496570 NCBP2LA6PVI3 153 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 HSPA12AO43301 675 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 PEX14O75381 377 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 DIRAS3O95661 229 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 GSTP1P09211 210 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 CSF1P09603 554 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 DTYMKP23919 212 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 GPR12P47775 334 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 LINC00205P59089 165 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 MRPS15P82914 257 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 ARFRP1Q13795 201 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 KIR2DS1Q14954 304 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 ARL6IP1Q15041 203 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 GLDNQ6ZMI3 551 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 NDUFA11Q86Y39 141 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 EDARADDQ8WWZ3 215 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 HSPB9Q9BQS6 159 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 RNF150Q9ULK6 438 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 SPATA2Q9UM82 520 aa12.73□□□□□ -0.37
DNMT3A-215ENST00000496570 H0YJW9 148 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 BET1O15155 118 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 TMEM127O75204 238 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 SCGNO76038 276 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 SERPINB10P48595 397 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 ACTBP60709 375 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 NCS1P62166 190 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 NSUN5P1Q3KNT7 163 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 FAM131AQ6UXB0 335 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 CENPVQ7Z7K6 275 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 FAM110DQ8TAY7 271 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 NAA50Q9GZZ1 169 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 GHITMQ9H3K2 345 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 LINC00527Q9UJ94 153 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 NOTCH1P46531 2555 aa12.72□□□□□ -0.37
DNMT3A-215ENST00000496570 VBP1P61758 197 aa12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 PNLIPRP3Q17RR3 467 aa12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 SLC35E3Q7Z769 313 aa12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 ZNF329Q86UD4 541 aa12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 H1FOOQ8IZA3 346 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 DRAXINQ8NBI3 349 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 NPBQ8NG41 125 aa12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 OR5AN1Q8NGI8 311 aa12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 SLC25A46Q96AG3 418 aa12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 DCSTAMPQ9H295 470 aa12.71□□□□□ -0.37
DNMT3A-215ENST00000496570 TRAV18A0A075B6X5 111 aa12.7□□□□□ -0.38
DNMT3A-215ENST00000496570 NDUFA3O95167 84 aa12.7□□□□□ -0.38
DNMT3A-215ENST00000496570 TALDO1P37837 337 aa12.7□□□□□ -0.38
DNMT3A-215ENST00000496570 MMDQ15546 238 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms