RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SLC23A1Q9UHI7 598 aa9.99□□□□□ -0.81
PTPRF-214ENST00000496043 AK3Q9UIJ7 227 aa9.99□□□□□ -0.81
PTPRF-214ENST00000496043 SAA2-SAA4A0A096LPE2 208 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 ITGB1BP1O14713 200 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 NBR2O15453 112 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 ST8SIA5O15466 376 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 SAA2P0DJI9 122 aaPredicted RBP9.98□□□□□ -0.81
PTPRF-214ENST00000496043 SLC2A2P11168 524 aaPredicted RBP9.98□□□□□ -0.81
PTPRF-214ENST00000496043 ZBTB25P24278 435 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 CALRP27797 417 aaKnown RBP9.98□□□□□ -0.81
PTPRF-214ENST00000496043 MC5RP33032 325 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 MAP2K4P45985 399 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 HSPA13P48723 471 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 VEGFCP49767 419 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 TMEM50BP56557 158 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 RAB25P57735 213 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 FABP5Q01469 135 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 CFHR3Q02985 330 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 C5orf64Q2M2E5 130 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 FAM71F2Q6NXP2 309 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 TMEM65Q6PI78 240 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 NPBQ8NG41 125 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 FAM3DQ96BQ1 224 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 DUX3Q96PT4 197 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 IFI27L2Q9H2X8 130 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 OR51J1Q9H342 316 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 V9GY05 133 aa9.98□□□□□ -0.81
PTPRF-214ENST00000496043 WI2-2373I1.2A0A1W2PRP0 233 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 PDCD5O14737 125 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 HSPA12AO43301 675 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 HLA-DRB1P01911 266 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 CT45A6P0DMU7 189 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 CT45A5P0DMU8 189 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 CT45A7P0DMV0 189 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 CNTFRP26992 372 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 PSMB8P28062 276 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 OR56B1Q8NGI3 324 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 OR5M8Q8NGP6 311 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 EDARADDQ8WWZ3 215 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 CMSS1Q9BQ75 279 aaKnown RBP9.97□□□□□ -0.81
PTPRF-214ENST00000496043 PECRQ9BY49 303 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 C11orf54Q9H0W9 315 aaPredicted RBP9.97□□□□□ -0.81
PTPRF-214ENST00000496043 Q9N2K0 584 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 RAB22AQ9UL26 194 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
PTPRF-214ENST00000496043 IGHV7-81A0A0B4J1V7 117 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 FOXI3A8MTJ6 420 aaPredicted RBP9.96□□□□□ -0.82
PTPRF-214ENST00000496043 DENRO43583 198 aaKnown RBP9.96□□□□□ -0.82
PTPRF-214ENST00000496043 NDUFA3O95167 84 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 GSTP1P09211 210 aaKnown RBP9.96□□□□□ -0.82
PTPRF-214ENST00000496043 SCTP09683 121 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 PPIFP30405 207 aaKnown RBP9.96□□□□□ -0.82
PTPRF-214ENST00000496043 CLDN12P56749 244 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 HLA-DRB3P79483 266 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 RPL39P5Q59GN2 51 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF660Q6AZW8 331 aaPredicted RBP9.96□□□□□ -0.82
PTPRF-214ENST00000496043 IZUMO2Q6UXV1 221 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 C4orf3Q8WVX3 66 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 ARHGAP5-AS1Q96IT6 56 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 ABHD14BQ96IU4 210 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 CNBD2Q96M20 576 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 RNF5Q99942 180 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 AGMATQ9BSE5 352 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 HDHD3Q9BSH5 251 aaPredicted RBP9.96□□□□□ -0.82
PTPRF-214ENST00000496043 C12orf4Q9NQ89 552 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 PARP11Q9NR21 331 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 BLOC1S6Q9UL45 172 aa9.96□□□□□ -0.82
PTPRF-214ENST00000496043 TRAV41A0A0B4J266 112 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 OR5H14A6NHG9 310 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 TRDCB7Z8K6 153 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 G3V318 75 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 H7C2Y5 167 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 ATP6V0E1O15342 81 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 RAMP3O60896 148 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 RBBP9O75884 186 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 MRPS15P82914 257 aaKnown RBP9.95□□□□□ -0.82
PTPRF-214ENST00000496043 DGCR2P98153 550 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 DCTN2Q13561 401 aaKnown RBP9.95□□□□□ -0.82
PTPRF-214ENST00000496043 PLGLAQ15195 96 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 DEFB136Q30KP8 78 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 FAM131AQ6UXB0 335 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF367Q7RTV3 350 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF491Q8N8L2 437 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 OR5AN1Q8NGI8 311 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 PTX4Q96A99 478 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 UBE2E2Q96LR5 201 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 OR1A1Q9P1Q5 309 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 ZNF221Q9UK13 617 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 RNF150Q9ULK6 438 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 VSIG4Q9Y279 399 aa9.95□□□□□ -0.82
PTPRF-214ENST00000496043 TRAV1-2A0A0B4J238 106 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 TMEM272A0A1B0GTI8 110 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 H0YJW9 148 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 RRHO14718 337 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 LDLRAD4O15165 306 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 IGLV1-40P01703 118 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 CD3GP09693 182 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 RAB9AP51151 201 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 CX3CL1P78423 397 aa9.94□□□□□ -0.82
PTPRF-214ENST00000496043 TMEM267Q0VDI3 215 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms