RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	STRADB	Q9C0K7	418 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	UFSP2	Q9NUQ7	469 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TRBV6-6	A0A0A6YYG2	114 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071		H7BYZ3	331 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	MSMO1	Q15800	293 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TMEM241	Q24JQ0	296 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR10A7	Q8NGE5	316 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR4F5	Q8NH21	305 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR4F4	Q96R69	305 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PKIB	Q9C010	78 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR51I2	Q9H344	312 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	NAT8	Q9UHE5	227 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	POLDIP2	Q9Y2S7	368 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	IDH3G	P51553	393 aa	Predicted RBP	11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PMP22	Q01453	160 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	MEF2B	Q02080	365 aa	Predicted RBP	11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	GAMT	Q14353	236 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF585B	Q52M93	769 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	MDP1	Q86V88	176 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	NINJ1	Q92982	152 aa		11.37	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SH2D1B	O14796	132 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	G6PC	P35575	357 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ERVS71-1	P61550	626 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZXDA	P98168	799 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CDH20	Q9HBT6	801 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	DOCK10	Q96BY6	2186 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TSTD3	H0UI37	97 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TBC1D28	Q2M2D7	210 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	BSX	Q3C1V8	233 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	C16orf82	Q7Z2V1	217 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR2D2	Q9H210	308 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CLN8	Q9UBY8	286 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PPP5D1	E7EU14	171 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SELE	P16581	610 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CEBPD	P49716	269 aa	Predicted RBP	11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	MRPL49	Q13405	166 aa	Known RBP	11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	RNPS1	Q15287	305 aa	Known RBP	11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SP5	Q6BEB4	398 aa	Predicted RBP	11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SCCPDH	Q8NBX0	429 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CTDSP1	Q9GZU7	261 aa		11.36	□□□□□ -0.59
SUPT20H-222	ENST00000495071		A0A1W2PPQ1	181 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CD55	P08174	381 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	HIST1H1B	P16401	226 aa	Known RBP	11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	FGF7	P21781	194 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR3A1	P47881	315 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	SPINK9	Q5DT21	86 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CXorf67	Q86X51	503 aa	Predicted RBP	11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR2J1	Q9GZK6	312 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	DEFB127	Q9H1M4	99 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TMEM242	Q9NWH2	141 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	FREM2	Q5SZK8	3169 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	RND2	P52198	227 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TNFRSF9	Q07011	255 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071		Q6P435	159 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	FIP1L1	Q6UN15	594 aa	Known RBP	11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	RPP25L	Q8N5L8	163 aa	Known RBP	11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TMEM105	Q8N8V8	129 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR10G9	Q8NGN4	311 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR10G7	Q8NGN6	311 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PITPNC1	Q9UKF7	332 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CELSR3	Q9NYQ7	3312 aa		11.35	□□□□□ -0.59
SUPT20H-222	ENST00000495071	GALR1	P47211	349 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071		Q8IYB0	196 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR10P1	Q8NGE3	313 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	HIPK2	Q9H2X6	1198 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OBP2B	Q9NPH6	170 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	RAMP3	O60896	148 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	IGLV2-14	P01704	120 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PLA2G5	P39877	138 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	UBE2N	P61088	152 aa	Known RBP	11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	FFAR4	Q5NUL3	377 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF497	Q6ZNH5	498 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	GALM	Q96C23	342 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	CATR1	Q13166	79 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	BTNL3	Q6UXE8	466 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR1L1	Q8NH94	360 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	GPR87	Q9BY21	358 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	DOCK11	Q5JSL3	2073 aa		11.34	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TRBV24-1	A0A075B6N3	115 aa		11.33	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.33	□□□□□ -0.59
SUPT20H-222	ENST00000495071	PHOX2A	O14813	284 aa		11.33	□□□□□ -0.59
SUPT20H-222	ENST00000495071	TMEM164	Q5U3C3	297 aa		11.33	□□□□□ -0.59
SUPT20H-222	ENST00000495071	ZNF66	Q6ZN08	573 aa		11.33	□□□□□ -0.59
SUPT20H-222	ENST00000495071	OR4X1	Q8NH49	305 aa		11.33	□□□□□ -0.59
SUPT20H-222	ENST00000495071	MED12L	Q86YW9	2145 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	IGKV1D-33	P01593	117 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	IGKV1-33	P01594	117 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	GABRA2	P47869	451 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	MEOX1	P50221	254 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CD81	P60033	236 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PPP1CB	P62140	327 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	RTP5	Q14D33	572 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	HIST1H2BL	Q99880	126 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TMEM147	Q9BVK8	224 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CHD3	Q12873	2000 aa	Known RBP	11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	SS18L1	O75177	396 aa	Predicted RBP	11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	COX5A	P20674	150 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ACSM6	Q6P461	480 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms