RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 IDH3GP51553 393 aaPredicted RBP12.98□□□□□ -0.33
SDF4-207ENST00000494748 CNN1P51911 297 aaKnown RBP12.98□□□□□ -0.33
SDF4-207ENST00000494748 TMEM256Q8N2U0 113 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 NEK7Q8TDX7 302 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 KNTC1P50748 2209 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 YPEL1O60688 119 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 CBR3O75828 277 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 SPINK2P20155 84 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 G0S2P27469 103 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 PSMB3P49720 205 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 HNF4GQ14541 408 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 YRDCQ86U90 279 aaKnown RBP12.98□□□□□ -0.33
SDF4-207ENST00000494748 OR5P3Q8WZ94 311 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 YPEL2Q96QA6 119 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 TMEM9BQ9NQ34 198 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 DOCK11Q5JSL3 2073 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 SVILO95425 2214 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 FRYQ5TBA9 3013 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 C1QTNF9BB2RNN3 333 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 CXCL13O43927 109 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 CARD18P57730 90 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 CYB5R2Q6BCY4 276 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 MRPL41Q8IXM3 137 aaKnown RBP12.97□□□□□ -0.33
SDF4-207ENST00000494748 OR4F5Q8NH21 305 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 OR4F4Q96R69 305 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 RIMS4Q9H426 269 aaPredicted RBP12.97□□□□□ -0.33
SDF4-207ENST00000494748 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 HS3ST1O14792 307 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 P0C879 139 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 CCL2P13500 99 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 CCL7P80098 99 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 PRRG4Q9BZD6 226 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 PPP1R3CQ9UQK1 317 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 TRAPPC2LH3BP13 241 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 VENTXO95231 258 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 CYC1P08574 325 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 Q8N7P7 452 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 RDH5Q92781 318 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 CCDC74BQ96LY2 380 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 OCIAD1Q9NX40 245 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 DLL3Q9NYJ7 618 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 FKBP11Q9NYL4 201 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 PTPRBP23467 1997 aa12.97□□□□□ -0.33
SDF4-207ENST00000494748 TRAV39A0A0B4J263 110 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 GJE1A6NN92 205 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 DEFA4P12838 97 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 SSR4P51571 173 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 R3HDM4Q96D70 268 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 MANBALQ9NQG1 85 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 PXMP4Q9Y6I8 212 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 RFPL3SP0C7P2 107 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 LCN2P80188 198 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 OR8G2PQ6IF36 304 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 LINC00596Q86U02 117 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 ABHD3Q8WU67 409 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 THOC3Q96J01 351 aaKnown RBP12.96□□□□□ -0.33
SDF4-207ENST00000494748 RBM14Q96PK6 669 aaKnown RBP12.96□□□□□ -0.33
SDF4-207ENST00000494748 DCAF16Q9NXF7 216 aa12.96□□□□□ -0.33
SDF4-207ENST00000494748 CACNA1EQ15878 2313 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 M0R143 59 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 DEGS1O15121 323 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 SOX15O60248 233 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 LINC00310P59036 64 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 TFF3Q07654 80 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 HLA-BQ31612 363 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 DCAF10Q5QP82 559 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 BTNL3Q6UXE8 466 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 LINC01551Q86U37 167 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 MKXQ8IYA7 352 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 OR10D3Q8NH80 312 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 WDR54Q9H977 334 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 TP53TG3Q9ULZ0 132 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 DMDP11532 3685 aa12.96□□□□□ -0.34
SDF4-207ENST00000494748 PIGBOS1A0A0B4J2F0 54 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 A0A1W2PR80 420 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 S100GP29377 79 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 GCH1P30793 250 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 WNT5AP41221 380 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 Q6P435 159 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 HSPB7Q9UBY9 170 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 NAGKQ9UJ70 344 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 PAGE4O60829 102 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 KLF7O75840 302 aaPredicted RBP12.95□□□□□ -0.34
SDF4-207ENST00000494748 IGHV3-9P01782 118 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 OR10G9Q8NGN4 311 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 OR10G7Q8NGN6 311 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 PCSK5Q92824 1860 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 FAM90A26D6RGX4 464 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 SRD5A2P31213 254 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 CHRNA7P36544 502 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 MLF1P58340 268 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 OR1L1Q8NH94 360 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 IL1F10Q8WWZ1 152 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
SDF4-207ENST00000494748 KMT2EQ8IZD2 1858 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 PI4KAP42356 2102 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 TRIP6Q15654 476 aaKnown RBP12.94□□□□□ -0.34
SDF4-207ENST00000494748 IGFBP7Q16270 282 aa12.94□□□□□ -0.34
SDF4-207ENST00000494748 VWC2Q2TAL6 325 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms