RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GVQW1Q8N7I0 195 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 OR4F5Q8NH21 305 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 OR10J5Q8NHC4 309 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 LINC01006Q8NI28 216 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 EDARADDQ8WWZ3 215 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 ABHD14BQ96IU4 210 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 ZNF251Q9BRH9 671 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 C16orf95Q9H693 158 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 BEX1Q9HBH7 125 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 PIPOXQ9P0Z9 390 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 MMP24Q9Y5R2 645 aa10.84□□□□□ -0.67
COL1A1-208ENST00000494334 SAA2-SAA4A0A096LPE2 208 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 A0A1B0GUS0 222 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 SMIM31A0A1B0GVY4 71 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 ZNF736B4DX44 427 aaPredicted RBP10.83□□□□□ -0.68
COL1A1-208ENST00000494334 RAB29O14966 203 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 TXNL1O43396 289 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 OR2F2O95006 317 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 IGKV1D-33P01593 117 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 IGKV1-33P01594 117 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 LPLP06858 475 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 SAA2P0DJI9 122 aaPredicted RBP10.83□□□□□ -0.68
COL1A1-208ENST00000494334 EBI3Q14213 229 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 CNIH2Q6PI25 160 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 HOGA1Q86XE5 327 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 RBM14Q96PK6 669 aaKnown RBP10.83□□□□□ -0.68
COL1A1-208ENST00000494334 SLC25A33Q9BSK2 321 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 NPFFR1Q9GZQ6 430 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 RBM38Q9H0Z9 239 aaKnown RBP10.83□□□□□ -0.68
COL1A1-208ENST00000494334 GHITMQ9H3K2 345 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 CCDC59Q9P031 241 aaKnown RBP10.83□□□□□ -0.68
COL1A1-208ENST00000494334 ANXA10Q9UJ72 324 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 RNF150Q9ULK6 438 aa10.83□□□□□ -0.68
COL1A1-208ENST00000494334 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 MEIS3P1A6NDR6 274 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 CCDC160A6NGH7 325 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 FAM25AB3EWG3 89 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 FAM25CB3EWG5 89 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 FAM25GB3EWG6 89 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 CTDSP2O14595 271 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 PROP1O75360 226 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 CTXN2P0C2S0 81 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 CD1BP29016 333 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 CBX5P45973 191 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 BLCAPP62952 87 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 HES1Q14469 280 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 HNF4GQ14541 408 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 RPL39P5Q59GN2 51 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 FAM71F2Q6NXP2 309 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 C16orf82Q7Z2V1 217 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 H1FOOQ8IZA3 346 aaPredicted RBP10.82□□□□□ -0.68
COL1A1-208ENST00000494334 BEST4Q8NFU0 473 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 RBMXL1Q96E39 390 aaKnown RBP10.82□□□□□ -0.68
COL1A1-208ENST00000494334 S1PR3Q99500 378 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 NABP2Q9BQ15 211 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 GINS4Q9BRT9 223 aa10.82□□□□□ -0.68
COL1A1-208ENST00000494334 RANBP3Q9H6Z4 567 aaPredicted RBP10.82□□□□□ -0.68
COL1A1-208ENST00000494334 MRPS7Q9Y2R9 242 aaKnown RBP10.82□□□□□ -0.68
COL1A1-208ENST00000494334 FCER2P06734 321 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 OR8U9P0C7N5 309 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 CT45A6P0DMU7 189 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 CT45A5P0DMU8 189 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 CT45A7P0DMV0 189 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 TMEM11P17152 192 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 PRSS3P35030 304 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 LSAMPQ13449 338 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 Q6ZS46 218 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 OR4C13Q8NGP0 309 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 OR8U1Q8NH10 309 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 EAF1Q96JC9 268 aaPredicted RBP10.81□□□□□ -0.68
COL1A1-208ENST00000494334 AKR1E2Q96JD6 320 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 MRPL20Q9BYC9 149 aaKnown RBP10.81□□□□□ -0.68
COL1A1-208ENST00000494334 SLIRPQ9GZT3 109 aaKnown RBP10.81□□□□□ -0.68
COL1A1-208ENST00000494334 MIXL1Q9H2W2 232 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 ZNF702PQ9H963 129 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 EXTL2Q9UBQ6 330 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 SIGLEC9Q9Y336 463 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 RNF114Q9Y508 228 aa10.81□□□□□ -0.68
COL1A1-208ENST00000494334 RGS5O15539 181 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 AMY1AP04745 511 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 AMY2AP04746 511 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 NFYAP23511 347 aaPredicted RBP10.8□□□□□ -0.68
COL1A1-208ENST00000494334 GPR12P47775 334 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 SNX29P2Q8IUI4 249 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 Q8N2B8 174 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 Q8N6K4 173 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 C3orf56Q8N813 242 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 OR2T10Q8NGZ9 312 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 GPX8Q8TED1 209 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 SNAPC3Q92966 411 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 RSL24D1Q9UHA3 163 aaKnown RBP10.8□□□□□ -0.68
COL1A1-208ENST00000494334 ZNF221Q9UK13 617 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 ANAPC10Q9UM13 185 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 GAB2Q9UQC2 676 aa10.8□□□□□ -0.68
COL1A1-208ENST00000494334 J3QRK9 145 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 MOSP00540 346 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 PROK1P58294 105 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 ARPC4P59998 168 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 GLDNQ6ZMI3 551 aaPredicted RBP10.79□□□□□ -0.68
COL1A1-208ENST00000494334 LAX1Q8IWV1 398 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms