RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PALMDQ9NP74 551 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 ABCB10Q9NRK6 738 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 MAST4O15021 2626 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 VPS13CQ709C8 3753 aa12.15□□□□□ -0.47
ACTB-213ENST00000493945 RNF212BA8MTL3 300 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 HSD17B6O14756 317 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 TUSC2O75896 110 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 GAPDHP04406 335 aaKnown RBP12.14□□□□□ -0.47
ACTB-213ENST00000493945 OR8U9P0C7N5 309 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 IGHV4-38-2P0DP08 117 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 BRS3P32247 399 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 FXYD4P59646 89 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 KLF9Q13886 244 aaPredicted RBP12.14□□□□□ -0.47
ACTB-213ENST00000493945 SURF2Q15527 256 aaPredicted RBP12.14□□□□□ -0.47
ACTB-213ENST00000493945 TGIF2LXQ8IUE1 241 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 SLC38A6Q8IZM9 456 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 OR8H3Q8N146 312 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 ZNF645Q8N7E2 425 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 ZNF439Q8NDP4 499 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 OR8U1Q8NH10 309 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 ZFAND1Q8TCF1 268 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 SECTM1Q8WVN6 248 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 MOB3AQ96BX8 217 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 ADTRPQ96IZ2 230 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 AKR1E2Q96JD6 320 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 TINAGL1Q9GZM7 467 aaPredicted RBP12.14□□□□□ -0.47
ACTB-213ENST00000493945 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
ACTB-213ENST00000493945 SLC2A8Q9NY64 477 aa12.14□□□□□ -0.47
ACTB-213ENST00000493945 A0A1W2PRD5 423 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 A0A1W2PRF3 423 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 A0A1W2PRM7 423 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 LANCL1O43813 399 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 FSHBP01225 129 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 IGHV3-7P01780 117 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 PGAM2P15259 253 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 AADACP22760 399 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 ZNF137PP52743 207 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 TAGLNQ01995 201 aaKnown RBP12.13□□□□□ -0.47
ACTB-213ENST00000493945 CATR1Q13166 79 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 BAK1Q16611 211 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 ABCA11PQ4W5N1 156 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 CT45A1Q5HYN5 189 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 HCP5Q6MZN7 132 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 CCDC71LQ8N9Z2 235 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 TERB2Q8NHR7 220 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 CT45A3Q8NHU0 189 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 ZDHHC16Q969W1 377 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 ZNF486Q96H40 463 aaPredicted RBP12.13□□□□□ -0.47
ACTB-213ENST00000493945 SMR3AQ99954 134 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 SLC25A21Q9BQT8 299 aaPredicted RBP12.13□□□□□ -0.47
ACTB-213ENST00000493945 SLC5A7Q9GZV3 580 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 IFI27L2Q9H2X8 130 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 GAB2Q9UQC2 676 aa12.13□□□□□ -0.47
ACTB-213ENST00000493945 C14orf166Q9Y224 244 aaKnown RBP12.13□□□□□ -0.47
ACTB-213ENST00000493945 ZANQ9Y493 2812 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 IGHV3OR16-10A0A075B7F0 116 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 J3QRK9 145 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 AVPP01185 164 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 APOA2P02652 100 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 RAB13P51153 203 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 UCP3P55916 312 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 ZNF816Q0VGE8 651 aaPredicted RBP12.12□□□□□ -0.47
ACTB-213ENST00000493945 AANATQ16613 207 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 TPTE2P1Q5T6R2 138 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 BRD3OSQ6XYD6 125 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 IDO2Q6ZQW0 420 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 POC5Q8NA72 575 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 ZNF418Q8TF45 676 aaPredicted RBP12.12□□□□□ -0.47
ACTB-213ENST00000493945 JMJD8Q96S16 334 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 SDHCQ99643 169 aaPredicted RBP12.12□□□□□ -0.47
ACTB-213ENST00000493945 HSD17B10Q99714 261 aaKnown RBP12.12□□□□□ -0.47
ACTB-213ENST00000493945 HRASLSQ9HDD0 168 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 COPZ2Q9P299 210 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 CELSR1Q9NYQ6 3014 aa12.12□□□□□ -0.47
ACTB-213ENST00000493945 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 PIGBOS1A0A0B4J2F0 54 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 A0A1W2PPE3 182 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 GPR31O00270 319 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 LYRM1O43325 122 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
ACTB-213ENST00000493945 THBS3P49746 956 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 DLX1P56177 255 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 RBMS2Q15434 407 aaKnown RBP12.11□□□□□ -0.47
ACTB-213ENST00000493945 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
ACTB-213ENST00000493945 RUSC1-AS1Q66K80 236 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 C1orf229Q6ZS94 237 aaPredicted RBP12.11□□□□□ -0.47
ACTB-213ENST00000493945 OR51S1Q8NGJ8 323 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 OR56B4Q8NH76 319 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 DPAGT1Q9H3H5 408 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
ACTB-213ENST00000493945 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 LINC00854A0A1B0GVQ3 168 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 OR5H14A6NHG9 310 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 SLC31A2O15432 143 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 FAM157CP0CG43 387 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 RRASP10301 218 aa12.1□□□□□ -0.47
ACTB-213ENST00000493945 MC5RP33032 325 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms