RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CKS1BP61024 79 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 MGAT2Q10469 447 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 GUSBP11Q6P575 273 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 MMD2Q8IY49 270 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 C1orf174Q8IYL3 243 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 CLDN16Q9Y5I7 305 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 PARP4Q9UKK3 1724 aaKnown RBP6.84□□□□□ -1.31
BRCA1-221ENST00000493795 TRAV8-4A0A0B4J246 113 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 H0Y980 276 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 NKX2-8O15522 239 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 ATOH7Q8N100 152 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 DEFB124Q8NES8 71 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-221ENST00000493795 QTRT1Q9BXR0 403 aaKnown RBP6.84□□□□□ -1.31
BRCA1-221ENST00000493795 FRRS1LQ9P0K9 344 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 HILPDAQ9Y5L2 63 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 RIMBP3CA6NJZ7 1639 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 RIMBP3BA6NNM3 1639 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 RIMBP3Q9UFD9 1639 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 PPLO60437 1756 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 TCRBV5S1A1TA0A578 114 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-221ENST00000493795 SNRPCP09234 159 aaKnown RBP6.84□□□□□ -1.31
BRCA1-221ENST00000493795 SPINK2P20155 84 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 AGAP20933 346 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 RBM11P57052 281 aaKnown RBP6.84□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF645Q8N7E2 425 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 OR5AN1Q8NGI8 311 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 MS4A4AQ96JQ5 239 aa6.84□□□□□ -1.31
BRCA1-221ENST00000493795 MICAL3Q7RTP6 2002 aa6.84□□□□□ -1.32
BRCA1-221ENST00000493795 ATP5LO75964 103 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 TDGF1P13385 188 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 RPL8P62917 257 aaKnown RBP6.83□□□□□ -1.32
BRCA1-221ENST00000493795 LCN2P80188 198 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 CADM4Q8NFZ8 388 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 TNFRSF12AQ9NP84 129 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 V9GYH0 126 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 UBR1Q8IWV7 1749 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 MYH6P13533 1939 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 A0A1W2PQD3 144 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 C7orf66A4D0T2 115 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 LIPT2A6NK58 231 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 NPIPB8E9PQR5 432 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 NPIPB9F8W1W9 429 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 TNFSF14O43557 240 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 NPIPB7O75200 414 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM50AO95807 157 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 RUNX1Q01196 453 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 PSMG4Q5JS54 123 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 SPINK14Q6IE38 97 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 ZNF600Q6ZNG1 722 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 SHISA5Q8N114 240 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 MYH7P12883 1935 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 C16orf97H3BN30 126 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 TGFAP01135 160 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 FCARP24071 287 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 NKG7Q16617 165 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 CHST5Q9GZS9 411 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 THY1P04216 161 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 NUTF2P61970 127 aaKnown RBP6.83□□□□□ -1.32
BRCA1-221ENST00000493795 CTAG1AP78358 180 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 PAX2Q02962 417 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 SAPCD1Q5SSQ6 148 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 HCP5Q6MZN7 132 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 RNASEH2CQ8TDP1 164 aaKnown RBP6.83□□□□□ -1.32
BRCA1-221ENST00000493795 CT55Q8WUE5 264 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 SPSB4Q96A44 273 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 DNAJC4Q9NNZ3 241 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 KCPQ6ZWJ8 1503 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 FXYD1O00168 92 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 PF4P02776 101 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 C8orf88P0DMB2 117 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 SPEM2Q0P670 501 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM196Q5HYL7 178 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 EEF1AKMT3Q96AZ1 226 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 SCGB3A1Q96QR1 104 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 MRPL32Q9BYC8 188 aaKnown RBP6.83□□□□□ -1.32
BRCA1-221ENST00000493795 TOMM7Q9P0U1 55 aa6.83□□□□□ -1.32
BRCA1-221ENST00000493795 MALP21145 153 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 RND2P52198 227 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 PCSK4Q6UW60 755 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 SLC25A15Q9Y619 301 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM131LA2VDJ0 1609 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 GCM2O75603 506 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-221ENST00000493795 IGLV3-27P01718 113 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 KLK2P20151 261 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 MAGEA5P43359 124 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 RPS11P62280 158 aaKnown RBP eCLIP6.82□□□□□ -1.32
BRCA1-221ENST00000493795 HIKESHIQ53FT3 197 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 MIC13Q5XKP0 118 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 THSD4Q6ZMP0 1018 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 C19orf24Q9BVV8 132 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 MYH11P35749 1972 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 DPRXA6NFQ7 191 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 MGST3O14880 152 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 LDLRAD4O15165 306 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 SYNGR3O43761 229 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 ZNF688P0C7X2 276 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 ASIPP42127 132 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 APOBEC4Q8WW27 367 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms