RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 PEF1Q9UBV8 284 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 SLC23A1Q9UHI7 598 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 EXOGQ9Y2C4 368 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 A0A1W2PP11 408 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 FAM90A7PA6NKC0 464 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 FAM90A23PA8MXZ1 464 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 H0YJW9 148 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 SLC22A1O15245 554 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 SPDEFO95238 335 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 CA2P00918 260 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 GLAP06280 429 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 CD2P06729 351 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 POLR2IP36954 125 aaKnown RBP10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 SLC22A6Q4U2R8 563 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 RAB12Q6IQ22 244 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 ZNF343Q6P1L6 599 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 CEMP1Q6PRD7 247 aaPredicted RBP10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 OR2AK2Q8NG84 335 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 ALG8Q9BVK2 526 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 ZNF355PQ9NSJ1 428 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 PIPOXQ9P0Z9 390 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 METTL1Q9UBP6 276 aaKnown RBP10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 WASHC3Q9Y3C0 194 aa10.74□□□□□ -0.69
PRPF40A-211ENST00000493468 ZNF785A8K8V0 405 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 OR11H12B2RN74 326 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 RAB29O14966 203 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 MAS1P04201 325 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 GSTP1P09211 210 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 CD7P09564 240 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 CT45A6P0DMU7 189 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 CT45A5P0DMU8 189 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 CT45A7P0DMV0 189 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 PPP3R1P63098 170 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 PMS2P11Q13670 270 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 RPEL1Q2QD12 228 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 CD300EQ496F6 205 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 MEDAGQ5VYS4 303 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 OR5AN1Q8NGI8 311 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 TMEM68Q96MH6 324 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 OVOL2Q9BRP0 275 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 ISG20L2Q9H9L3 353 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 ADAM30Q9UKF2 790 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 KLK5Q9Y337 293 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 LRRC42Q9Y546 428 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 DNAH6Q9C0G6 4158 aa10.73□□□□□ -0.69
PRPF40A-211ENST00000493468 E9PI62 339 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 ATF4P18848 351 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 BDKRB2P30411 391 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 SOX2P48431 317 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 PSG5Q15238 335 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 DMKNQ6E0U4 476 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 GPR148Q8TDV2 347 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 GALMQ96C23 342 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 KCTD12Q96CX2 325 aaKnown RBP10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 USMG5Q96IX5 58 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 TINAGL1Q9GZM7 467 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 WFDC10AQ9H1F0 79 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 ZC4H2Q9NQZ6 224 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 IMPAD1Q9NX62 359 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 POMPQ9Y244 141 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 PEX16Q9Y5Y5 336 aa10.72□□□□□ -0.69
PRPF40A-211ENST00000493468 SNTNA6NMZ2 147 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 H7C2Y5 167 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 GPX5O75715 221 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 NDUFB8O95169 186 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 TRBV12-3P01733 135 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 GBX2P52951 348 aaPredicted RBP10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 GYS2P54840 703 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 SNRPGP62308 76 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 TNFRSF9Q07011 255 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 FXYD3Q14802 87 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 VPS13DQ5THJ4 4388 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 LHFPL3Q86UP9 236 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 BVESQ8NE79 360 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 GRPEL2Q8TAA5 225 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 MRPL30Q8TCC3 161 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 LGALS12Q96DT0 336 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 TSNAXQ99598 290 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 STEAP1Q9UHE8 339 aa10.71□□□□□ -0.69
PRPF40A-211ENST00000493468 DEDDO75618 318 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 FUT3P21217 361 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 DYRK1AQ13627 763 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 HMGN3Q15651 99 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 RPL39P5Q59GN2 51 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 C6orf141Q5SZD1 244 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 GLDNQ6ZMI3 551 aaPredicted RBP10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 OR5T1Q8NG75 326 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 SNAPC3Q92966 411 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 OR14A2Q96R54 314 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 ZNF184Q99676 751 aaPredicted RBP10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 SULT4A1Q9BR01 284 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 GGTLC1Q9BX51 225 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 ERVK13-1Q9NX77 482 aa10.7□□□□□ -0.7
PRPF40A-211ENST00000493468 A0A0B4J203 849 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 ITGB1BP1O14713 200 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 ST8SIA5O15466 376 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 IGFBP3P17936 291 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms