RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ARID1AO14497 2285 aa11.65□□□□□ -0.54
PDZRN3-210ENST00000492909 YLPM1P49750 1951 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-210ENST00000492909 SPG11Q96JI7 2443 aa11.65□□□□□ -0.54
PDZRN3-210ENST00000492909 HEXAP06865 529 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 CGB3P0DN86 165 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 CGB7P0DN87 165 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 PGAM2P15259 253 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 VAMP1P23763 118 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 ATP5J2P56134 94 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 LRRC37A5PQ49AS3 106 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 RFESDQ8TAC1 157 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 THAP6Q8TBB0 222 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 CASTOR1Q8WTX7 329 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 CORO2AQ92828 525 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 TOMM40LQ969M1 308 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 PHYHIPLQ96FC7 376 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 BARX1Q9HBU1 254 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 CALYQ9NYX4 217 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 OR2W1Q9Y3N9 320 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 KBTBD11-OT1A0A1B0GTJ5 212 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 ZNF729A6NN14 1252 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 FAM25EA8MYX2 175 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 GPR37O15354 613 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 WNT2P09544 360 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 ZNF728P0DKX0 622 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 CEACAM6P40199 344 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 PDLIM4P50479 330 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 HTD2P86397 168 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 TUSC1Q2TAM9 212 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 ZNF841Q6ZN19 808 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 KCTD9Q7L273 389 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 TCF23Q7RTU1 214 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 NINJ1Q92982 152 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 C5orf66Q9H5L9 145 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 OR2S2Q9NQN1 319 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 C19orf12Q9NSK7 152 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 CLN8Q9UBY8 286 aa11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 C14orf166Q9Y224 244 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 UBE2J1Q9Y385 318 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-210ENST00000492909 POLQO75417 2590 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 A0A0B4J2A0 478 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 SFT2D2O95562 160 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 LUMP51884 338 aaPredicted RBP11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 UCP3P55916 312 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 C17orf58Q2M2W7 97 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 TMEM128Q5BJH2 165 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 OR52L2PQ8NGH6 319 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 NMES1Q9C002 83 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 PATZ1Q9HBE1 687 aaKnown RBP11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 TAS2R3Q9NYW6 316 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 SHPKQ9UHJ6 478 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 MALRD1Q5VYJ5 2156 aa11.63□□□□□ -0.55
PDZRN3-210ENST00000492909 TRBV23-1A0A0A0MS06 115 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 F2RL2O00254 374 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 CTSDP07339 412 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 PAX1P15863 534 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 PI3P19957 117 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 PSMB6P28072 239 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 CYCSP99999 105 aaKnown RBP11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 TAGLNQ01995 201 aaKnown RBP11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 FAM185AQ8N0U4 392 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 SECTM1Q8WVN6 248 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 TMEM230Q96A57 120 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 RTBDNQ9BSG5 229 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 ZNF471Q9BX82 626 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 TOLLIPQ9H0E2 274 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 GAL3ST2Q9H3Q3 398 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 LINC00574Q9H8X3 128 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 MBD2Q9UBB5 411 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 C5orf51A6NDU8 294 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 OMGP23515 440 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 ZNF273Q14593 569 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 WDR25Q64LD2 544 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 INO80EQ8NBZ0 244 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 FAM168AQ92567 244 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 ZNF714Q96N38 554 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 ARPC5LQ9BPX5 153 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 BPESC1Q9GZL8 116 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 GNG12Q9UBI6 72 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 JPT1Q9UK76 154 aa11.62□□□□□ -0.55
PDZRN3-210ENST00000492909 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 IGKV1D-13A0A0B4J2D9 117 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 F5H0A9 414 aaPredicted RBP11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 IGKV1-13P0DP09 117 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 PPP1CCP36873 323 aaKnown RBP11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 GNB2P62879 340 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 GNMTQ14749 295 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 LTC4SQ16873 150 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 TMEM30BQ3MIR4 351 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 ABCA11PQ4W5N1 156 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 FAM74A1Q5RGS3 127 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 OR10V1Q8NGI7 309 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 PERPQ96FX8 193 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 RSRP1Q9BUV0 290 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 SLC5A7Q9GZV3 580 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 RAB18Q9NP72 206 aa11.61□□□□□ -0.55
PDZRN3-210ENST00000492909 RBM7Q9Y580 266 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms