RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ELK1P19419 428 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 HNF4GQ14541 408 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 ODF3L1Q8IXM7 274 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 OR4C13Q8NGP0 309 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 CFHR4Q92496 578 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 ABHD14BQ96IU4 210 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 S1PR3Q99500 378 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 SLC25A33Q9BSK2 321 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 CABLES2Q9BTV7 478 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 IFI27L2Q9H2X8 130 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 GHITMQ9H3K2 345 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 ZNF221Q9UK13 617 aa11.2□□□□□ -0.62
CCM2-217ENST00000492883 RBM7Q9Y580 266 aaKnown RBP11.2□□□□□ -0.62
CCM2-217ENST00000492883 SAA2-SAA4A0A096LPE2 208 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 CLPSL1A2RUU4 121 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 RGS5O15539 181 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 TSPAN9O75954 239 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 OR2F2O95006 317 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 DIRAS3O95661 229 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 IGKV1D-33P01593 117 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 IGKV1-33P01594 117 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 FCER2P06734 321 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 SAA2P0DJI9 122 aaPredicted RBP11.19□□□□□ -0.62
CCM2-217ENST00000492883 TMEM11P17152 192 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 PRSS3P35030 304 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 CBX5P45973 191 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 OR3A3P47888 321 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 CNIH2Q6PI25 160 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 ZNF833PQ6ZTB9 187 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 C16orf82Q7Z2V1 217 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 GVQW1Q8N7I0 195 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 BEST4Q8NFU0 473 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 DYNC2LI1Q8TCX1 351 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 RBM14Q96PK6 669 aaKnown RBP11.19□□□□□ -0.62
CCM2-217ENST00000492883 IFT46Q9NQC8 304 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 ANXA10Q9UJ72 324 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 DSCAML1Q8TD84 2053 aa11.19□□□□□ -0.62
CCM2-217ENST00000492883 MEIS3P1A6NDR6 274 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 HAX1O00165 279 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 OR8U9P0C7N5 309 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 CD1BP29016 333 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 GPR12P47775 334 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 ARPC4P59998 168 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 HABP2Q14520 560 aaPredicted RBP11.18□□□□□ -0.62
CCM2-217ENST00000492883 RPL39P5Q59GN2 51 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 HOGA1Q86XE5 327 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 OR2T10Q8NGZ9 312 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 OR8U1Q8NH10 309 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 LINC01006Q8NI28 216 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 AGMATQ9BSE5 352 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 PRSS22Q9GZN4 317 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 TOLLIPQ9H0E2 274 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 RANBP3Q9H6Z4 567 aaPredicted RBP11.18□□□□□ -0.62
CCM2-217ENST00000492883 CCDC59Q9P031 241 aaKnown RBP11.18□□□□□ -0.62
CCM2-217ENST00000492883 RNF114Q9Y508 228 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 MMP24Q9Y5R2 645 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 MXRA5Q9NR99 2828 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 KIAA2026Q5HYC2 2103 aa11.18□□□□□ -0.62
CCM2-217ENST00000492883 ZNF736B4DX44 427 aaPredicted RBP11.17□□□□□ -0.62
CCM2-217ENST00000492883 J3QRK9 145 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 CTDSP2O14595 271 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 HLA-DQB1P01920 261 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 BLCAPP62952 87 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 FBLN7Q53RD9 439 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
CCM2-217ENST00000492883 FAM71F2Q6NXP2 309 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 SNX29P2Q8IUI4 249 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 H1FOOQ8IZA3 346 aaPredicted RBP11.17□□□□□ -0.62
CCM2-217ENST00000492883 OR2T6Q8NHC8 308 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
CCM2-217ENST00000492883 NABP2Q9BQ15 211 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 MRPL20Q9BYC9 149 aaKnown RBP11.17□□□□□ -0.62
CCM2-217ENST00000492883 EXTL2Q9UBQ6 330 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 RSL24D1Q9UHA3 163 aaKnown RBP11.17□□□□□ -0.62
CCM2-217ENST00000492883 ADAM30Q9UKF2 790 aa11.17□□□□□ -0.62
CCM2-217ENST00000492883 FBN1P35555 2871 aaKnown RBP11.17□□□□□ -0.62
CCM2-217ENST00000492883 M0QZK8 103 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 MOSP00540 346 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
CCM2-217ENST00000492883 LSAMPQ13449 338 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 EBI3Q14213 229 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 ABCA11PQ4W5N1 156 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 ZNF251Q9BRH9 671 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 C6orf62Q9GZU0 229 aaPredicted RBP11.16□□□□□ -0.62
CCM2-217ENST00000492883 OR2D2Q9H210 308 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 NECAP2Q9NVZ3 263 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 SIGLEC9Q9Y336 463 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 MOB4Q9Y3A3 225 aa11.16□□□□□ -0.62
CCM2-217ENST00000492883 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.62
CCM2-217ENST00000492883 CT45A6P0DMU7 189 aa11.15□□□□□ -0.62
CCM2-217ENST00000492883 CT45A5P0DMU8 189 aa11.15□□□□□ -0.62
CCM2-217ENST00000492883 CT45A7P0DMV0 189 aa11.15□□□□□ -0.62
CCM2-217ENST00000492883 LUMP51884 338 aaPredicted RBP11.15□□□□□ -0.62
CCM2-217ENST00000492883 C9orf152Q5JTZ5 239 aa11.15□□□□□ -0.62
CCM2-217ENST00000492883 DRAXINQ8NBI3 349 aaPredicted RBP11.15□□□□□ -0.62
CCM2-217ENST00000492883 ZNF747Q9BV97 191 aa11.15□□□□□ -0.62
CCM2-217ENST00000492883 MIXL1Q9H2W2 232 aa11.15□□□□□ -0.62
CCM2-217ENST00000492883 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
CCM2-217ENST00000492883 GAB2Q9UQC2 676 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms