RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 HTR4Q13639 388 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 FAM229BQ4G0N7 80 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 FAM151BQ6UXP7 276 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 FAM19A5Q7Z5A7 132 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 DNAAF3Q8N9W5 541 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 OR10D3Q8NH80 312 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 GPR119Q8TDV5 335 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 CYGBQ8WWM9 190 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 TLCD1Q96CP7 247 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 CMTM5Q96DZ9 223 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 SMIM19Q96E16 107 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 PACRGQ96M98 296 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 UPK3BQ9BT76 320 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 CDCA4Q9BXL8 241 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 EIF5A2Q9GZV4 153 aaKnown RBP1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 AICDAQ9GZX7 198 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 OR51B6Q9H340 312 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 SMDT1Q9H4I9 107 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 C16orf95Q9H693 158 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 ZNHIT6Q9NWK9 470 aaKnown RBP1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 FAM206AQ9NX38 181 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 HEY1Q9Y5J3 304 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 NPATQ14207 1427 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 DSCAML1Q8TD84 2053 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 MYO9BQ13459 2157 aa1.2□□□□□ -2.22
HMGB1P30-201ENST00000492455 COL18A1P39060 1754 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 LCTP09848 1927 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 A0A0A6YYH2 397 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 C19orf71A6NCJ1 209 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 A6NJ64 397 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 F5H768 121 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 COPEO14579 308 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 DEDDO75618 318 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 CRYBA1P05813 215 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 CBR1P16152 277 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 CXCL2P19875 107 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 IFNGR2P38484 337 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 DAPP51397 102 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 TSPEAR-AS2P59090 65 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 HERVK_113P63121 156 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 SLC35A2P78381 396 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 HPCAP84074 193 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 FOXF1Q12946 379 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 MED21Q13503 144 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 ACSBG2Q5FVE4 666 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 ATP5L2Q7Z4Y8 100 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 TMEM156Q8N614 296 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 NATD1Q8N6N6 113 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 SLC37A2Q8TED4 501 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 ASB13Q8WXK3 278 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 NSRP1Q9H0G5 558 aaKnown RBP1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 C11orf1Q9H5F2 150 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 TAS2R9Q9NYW1 312 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 DNAJC12Q9UKB3 198 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 RIMS2Q9UQ26 1411 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 ALG5Q9Y673 324 aa1.19□□□□□ -2.22
HMGB1P30-201ENST00000492455 ICE1Q9Y2F5 2266 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 EIF4G1Q04637 1599 aaKnown RBP1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 CEP170Q5SW79 1584 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 IGHV3-73A0A0B4J1V6 119 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 DHRS12A0PJE2 317 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 LINC00862A6NCI5 91 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 C17orf51A8MQB3 221 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 J3QRE1 110 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 MRASO14807 208 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 CRTAPO75718 401 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 CD7P09564 240 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 ESDP10768 282 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 CXCL3P19876 107 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 LPAR6P43657 344 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 SNAP25P60880 206 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 ZNF117Q03924 483 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 COTL1Q14019 142 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 SLC36A2Q495M3 483 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 RASL11AQ6T310 242 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 ZNF322Q6U7Q0 402 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 IQCF2Q8IXL9 164 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 OR11H1Q8NG94 326 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 OR5C1Q8NGR4 320 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 KCTD7Q96MP8 289 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 MBOAT7Q96N66 472 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 TBX5Q99593 518 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 LRRC19Q9H756 370 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 HDGFL3Q9Y3E1 203 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 CACNA1SQ13698 1873 aa1.18□□□□□ -2.22
HMGB1P30-201ENST00000492455 PTPRJQ12913 1337 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 TRPM6Q9BX84 2022 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 TRAV8-1A0A0A6YYK1 113 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 TEX50A0A1B0GTY4 177 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 ODF3BA8MYP8 253 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 ZNF878C9JN71 531 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 LY6HO94772 140 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 SOD1P00441 154 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 COX5BP10606 129 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 CPMP14384 443 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 SLC25A16P16260 332 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 ZNF7P17097 686 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 CRYBB3P26998 211 aa1.17□□□□□ -2.22
HMGB1P30-201ENST00000492455 ATP6V0CP27449 155 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms