RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SPOCK3Q9BQ16 436 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 CISD1Q9NZ45 108 aaKnown RBP19.1■□□□□ 0.65
USF3-203ENST00000491165 FBXO7Q9Y3I1 522 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 A0A1B0GW64 132 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 IGSF23A1L1A6 192 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 NAPSAO96009 420 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 IGHV3-13P01766 116 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 FGF12P61328 243 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 POLR2GP62487 172 aaKnown RBP eCLIP19.09■□□□□ 0.65
USF3-203ENST00000491165 CLINT1Q14677 625 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 ZNF672Q499Z4 452 aaPredicted RBP19.09■□□□□ 0.65
USF3-203ENST00000491165 SELENOHQ8IZQ5 122 aaKnown RBP19.09■□□□□ 0.65
USF3-203ENST00000491165 ABHD14BQ96IU4 210 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 C20orf24Q9BUV8 137 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 PLEKHF2Q9H8W4 249 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 MSL2Q9HCI7 577 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 AKAP6Q13023 2319 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 TUBG1P23258 451 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 CA6P23280 308 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 PPP1CCP36873 323 aaKnown RBP19.09■□□□□ 0.65
USF3-203ENST00000491165 HAAOP46952 286 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 SNRPEP62304 92 aaKnown RBP19.09■□□□□ 0.65
USF3-203ENST00000491165 RHEBQ15382 184 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 SP5Q6BEB4 398 aaPredicted RBP19.09■□□□□ 0.65
USF3-203ENST00000491165 ZNF818PQ6ZRF7 136 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 SLC25A31Q9H0C2 315 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 TUBG2Q9NRH3 451 aa19.09■□□□□ 0.65
USF3-203ENST00000491165 CACNA1DQ01668 2161 aa19.08■□□□□ 0.65
USF3-203ENST00000491165 H0YL77 283 aa19.08■□□□□ 0.64
USF3-203ENST00000491165 SSSCA1O60232 199 aa19.08■□□□□ 0.64
USF3-203ENST00000491165 GPM6AP51674 278 aa19.08■□□□□ 0.64
USF3-203ENST00000491165 KLF3P57682 345 aaPredicted RBP19.08■□□□□ 0.64
USF3-203ENST00000491165 RPS23P62266 143 aaKnown RBP19.08■□□□□ 0.64
USF3-203ENST00000491165 ZNF561Q8N587 486 aa19.08■□□□□ 0.64
USF3-203ENST00000491165 CD300LFQ8TDQ1 290 aa19.08■□□□□ 0.64
USF3-203ENST00000491165 LYRM2Q9NU23 88 aaPredicted RBP19.08■□□□□ 0.64
USF3-203ENST00000491165 RAI1Q7Z5J4 1906 aaPredicted RBP19.08■□□□□ 0.64
USF3-203ENST00000491165 DUXBA0A1W2PPF3 345 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 TIMM8AO60220 97 aaPredicted RBP19.07■□□□□ 0.64
USF3-203ENST00000491165 SCTP09683 121 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 VAMP2P63027 116 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 ZDHHC23Q8IYP9 409 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 GAPTQ8N292 157 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 OR2G3Q8NGZ4 309 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 CHD3Q12873 2000 aaKnown RBP19.07■□□□□ 0.64
USF3-203ENST00000491165 CSMD1Q96PZ7 3565 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 KIR2DS1A0A191URI9 304 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 A0A1B0GV50 99 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 MLNRO43193 412 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 ADAM20O43506 726 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 EIF3GO75821 320 aaKnown RBP eCLIP19.07■□□□□ 0.64
USF3-203ENST00000491165 S100A6P06703 90 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 ATP6V0CP27449 155 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 KIR2DS4P43632 304 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 CTAG1AP78358 180 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 KIR2DS1Q14954 304 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 MPV17LQ2QL34 196 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 CEACAM21Q3KPI0 293 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 KRBOX4Q5JUW0 171 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 OR8G5Q8NG78 346 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 ISOC2Q96AB3 205 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 SMDT1Q9H4I9 107 aa19.07■□□□□ 0.64
USF3-203ENST00000491165 A0A1W2PPH5 198 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 OMGP23515 440 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 TMEM252Q8N6L7 170 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 PSMG3-AS1Q96PY0 264 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 PLK3Q9H4B4 646 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 A6NLC8 198 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 OR13C7P0DN81 318 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 DAOP14920 347 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 HERPUD1Q15011 391 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 C5orf24Q7Z6I8 188 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 ZCCHC24Q8N2G6 241 aaKnown RBP19.06■□□□□ 0.64
USF3-203ENST00000491165 NEK7Q8TDX7 302 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 MAGT1Q9H0U3 335 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 IFT22Q9H7X7 185 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 TAAR3PQ9P1P4 343 aa19.06■□□□□ 0.64
USF3-203ENST00000491165 C5orf52A6NGY3 159 aa19.05■□□□□ 0.64
USF3-203ENST00000491165 HSPA12AO43301 675 aa19.05■□□□□ 0.64
USF3-203ENST00000491165 TUSC2O75896 110 aa19.05■□□□□ 0.64
USF3-203ENST00000491165 CTXN2P0C2S0 81 aa19.05■□□□□ 0.64
USF3-203ENST00000491165 UCP1P25874 307 aa19.05■□□□□ 0.64
USF3-203ENST00000491165 SULT1A1P50225 295 aa19.05■□□□□ 0.64
USF3-203ENST00000491165 S100A12P80511 92 aa19.05■□□□□ 0.64
USF3-203ENST00000491165 CXorf66Q5JRM2 361 aaPredicted RBP19.05■□□□□ 0.64
USF3-203ENST00000491165 PTPN13Q12923 2485 aa19.05■□□□□ 0.64
USF3-203ENST00000491165 IGKV1D-13A0A0B4J2D9 117 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 TRAPPC2LH3BP13 241 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 IGKV1-13P0DP09 117 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 SELEP16581 610 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 VDAC1P21796 283 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 APOBEC3AP31941 199 aaPredicted RBP19.04■□□□□ 0.64
USF3-203ENST00000491165 NMSQ5H8A3 153 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 MKXQ8IYA7 352 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 ASH1LQ9NR48 2969 aaKnown RBP19.04■□□□□ 0.64
USF3-203ENST00000491165 MTCH1Q9NZJ7 389 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 IGHV3-64DA0A0J9YX35 117 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 ANKRD30BLA7E2S9 258 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 ZNF732B4DXR9 585 aa19.04■□□□□ 0.64
USF3-203ENST00000491165 HSPB6O14558 160 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms