RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 UCP3P55916 312 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 EDDM3BP56851 147 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 SRPXP78539 464 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 AESQ08117 197 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 LRRC37A5PQ49AS3 106 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 IL34Q6ZMJ4 242 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 FAM185AQ8N0U4 392 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 CCDC71LQ8N9Z2 235 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 ZNRF1Q8ND25 227 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 OR8B3Q8NGG8 313 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 LHFPL5Q8TAF8 219 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 MAFIPQ8WZ33 124 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 ARL11Q969Q4 196 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 SAT2Q96F10 170 aaPredicted RBP9.71□□□□□ -0.86
TRIM40-208ENST00000489892 GALNT14Q96FL9 552 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 COQ2Q96H96 371 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 SEC22AQ96IW7 307 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 KIRREL1Q96J84 757 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 LINC00052Q96N35 136 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 OR8B2Q96RD0 313 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 CCL13Q99616 98 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 RTBDNQ9BSG5 229 aaPredicted RBP9.71□□□□□ -0.86
TRIM40-208ENST00000489892 SUCNR1Q9BXA5 334 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 GAL3ST2Q9H3Q3 398 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 METTL8Q9H825 291 aaKnown RBP9.71□□□□□ -0.86
TRIM40-208ENST00000489892 TAF9BQ9HBM6 251 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 KCNIP3Q9Y2W7 256 aa9.71□□□□□ -0.86
TRIM40-208ENST00000489892 C13orf42A0A1B0GVH6 325 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 CRYM-AS1A6NIL9 109 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 NDUFS8O00217 210 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 GAPDHP04406 335 aaKnown RBP9.7□□□□□ -0.86
TRIM40-208ENST00000489892 RPS2P15880 293 aaKnown RBP9.7□□□□□ -0.86
TRIM40-208ENST00000489892 HOXB4P17483 251 aaPredicted RBP9.7□□□□□ -0.86
TRIM40-208ENST00000489892 NDUFB7P17568 137 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 GPR6P46095 362 aaPredicted RBP9.7□□□□□ -0.86
TRIM40-208ENST00000489892 PDLIM4P50479 330 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 DSCR9P59020 149 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 SUPT4H1P63272 117 aaKnown RBP9.7□□□□□ -0.86
TRIM40-208ENST00000489892 CR1LQ2VPA4 569 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 FAM201AQ5SY85 155 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 SLC38A6Q8IZM9 456 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 LRTM2Q8N967 370 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 PCNPQ8WW12 178 aaKnown RBP9.7□□□□□ -0.86
TRIM40-208ENST00000489892 ZNF2Q9BSG1 426 aaPredicted RBP9.7□□□□□ -0.86
TRIM40-208ENST00000489892 PLEKHA2Q9HB19 425 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 TAS2R3Q9NYW6 316 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 UBE2J1Q9Y385 318 aaPredicted RBP9.7□□□□□ -0.86
TRIM40-208ENST00000489892 LINC00312Q9Y6C7 94 aa9.7□□□□□ -0.86
TRIM40-208ENST00000489892 IGKV1D-8A0A087WSZ0 117 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 ZNF729A6NN14 1252 aaPredicted RBP9.69□□□□□ -0.86
TRIM40-208ENST00000489892 SDCBPO00560 298 aaPredicted RBP9.69□□□□□ -0.86
TRIM40-208ENST00000489892 RCC1P18754 421 aaPredicted RBP9.69□□□□□ -0.86
TRIM40-208ENST00000489892 COL8A2P25067 703 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 FCGR2CP31995 323 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 CDKN1AP38936 164 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 GLIPR1P48060 266 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 RPL31P62899 125 aaKnown RBP9.69□□□□□ -0.86
TRIM40-208ENST00000489892 HTD2P86397 168 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 IL15RAQ13261 267 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 SLC9A3R2Q15599 337 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 FAM216BQ8N7L0 139 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 OR10A7Q8NGE5 316 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 EDARADDQ8WWZ3 215 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 IGFBPL1Q8WX77 278 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 CORO2AQ92828 525 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 MARC2Q969Z3 335 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 MOB3AQ96BX8 217 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 NEIL1Q96FI4 390 aaPredicted RBP9.69□□□□□ -0.86
TRIM40-208ENST00000489892 DCAF16Q9NXF7 216 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 METRNQ9UJH8 293 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 POMT1Q9Y6A1 747 aa9.69□□□□□ -0.86
TRIM40-208ENST00000489892 NIPBLQ6KC79 2804 aaeCLIP9.68□□□□□ -0.86
TRIM40-208ENST00000489892 LOC105371267A0A1B0GV96 52 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 hCG_1809904A0A1W2PP81 198 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 A0A1W2PPE2 198 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 DUXBA0A1W2PPF3 345 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 A0A1W2PR64 198 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 A0A1W2PRV1 198 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 MPTX1A8MV57 137 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 TNFRSF13BO14836 293 aaPredicted RBP9.68□□□□□ -0.86
TRIM40-208ENST00000489892 ZNF205O95201 554 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 PPYP01298 95 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 HBZP02008 142 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 HEXAP06865 529 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 SCTP09683 121 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 ZNF728P0DKX0 622 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 PAX1P15863 534 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 BLOC1S1P78537 153 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 ANKRD55Q3KP44 614 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 ABCA11PQ4W5N1 156 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 TGIF2LYQ8IUE0 185 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 CMTM1Q8IZ96 169 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 ZNF295-AS1Q8N0V1 137 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 MRGPRDQ8TDS7 321 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 IL1F10Q8WWZ1 152 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 ABHD14BQ96IU4 210 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 RNF126Q9BV68 326 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 MMP26Q9NRE1 261 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 JPT1Q9UK76 154 aa9.68□□□□□ -0.86
TRIM40-208ENST00000489892 OR2W1Q9Y3N9 320 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms