RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 OR10X1Q8NGY0 326 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 OR2T10Q8NGZ9 312 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 TNFAIP8L1Q8WVP5 186 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 RTN4IP1Q8WWV3 396 aaPredicted RBP4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 ARL11Q969Q4 196 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 MRPL48Q96GC5 212 aaKnown RBP4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 MYCBPQ99417 103 aaPredicted RBP4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 S1PR3Q99500 378 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 GON7Q9BXV9 100 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 DHDHQ9UQ10 334 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 ST3GAL6Q9Y274 331 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 GMPPBQ9Y5P6 360 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 U3KQK5 164 aa4.94□□□□□ -1.62
PRPF40A-210ENST00000489741 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 CSMD3Q7Z407 3707 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 SNTNA6NMZ2 147 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 NCBP2LA6PVI3 153 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 I3L521 148 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 GEMIN2O14893 280 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 SLC31A2O15432 143 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 MAGEB3O15480 346 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 OGG1O15527 345 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 OR7C1O76099 320 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 CDRT1O95170 752 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 MOSP00540 346 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 REG1BP48304 166 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 LUMP51884 338 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 GBX2P52951 348 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 RSU1Q15404 277 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 MPV17LQ2QL34 196 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 DEFB136Q30KP8 78 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 CCDC58Q4VC31 144 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 CT45A1Q5HYN5 189 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 CXorf66Q5JRM2 361 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 C9orf66Q5T8R8 295 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 ASPHD1Q5U4P2 390 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 LPCAT4Q643R3 524 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 XAF1Q6GPH4 301 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 SLC25A48Q6ZT89 311 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 LINC00596Q86U02 117 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 SATL1Q86VE3 508 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 LYPD6Q86Y78 171 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 OR52I1Q8NGK6 324 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 OR5M8Q8NGP6 311 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 OR8U1Q8NH10 309 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 OR52N1Q8NH53 320 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 CT45A3Q8NHU0 189 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 GPR148Q8TDV2 347 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 C4orf3Q8WVX3 66 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 PYDC1Q8WXC3 89 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 MUL1Q969V5 352 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 RBMXL1Q96E39 390 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 CPNE2Q96FN4 548 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 HSPB9Q9BQS6 159 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 CHCHD6Q9BRQ6 235 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 METTL9Q9H1A3 318 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 AMBNQ9NP70 447 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 FGF20Q9NP95 211 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 TMEM138Q9NPI0 162 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 FAM118AQ9NWS6 357 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 TAS2R4Q9NYW5 299 aa4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 RCC2Q9P258 522 aaKnown RBP4.93□□□□□ -1.62
PRPF40A-210ENST00000489741 TRBV5-5A0A0J9YX44 114 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 A0A1W2PP11 408 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 TMEM30CPA0ZSE6 113 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 C12orf77C9JDV5 145 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 C3orf84H3BNL1 204 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 RHODO00212 210 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 WBP4O75554 376 aaKnown RBP4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 SC5DO75845 299 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 CHATP28329 748 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 INSL3P51460 131 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 RPS11P62280 158 aaKnown RBP eCLIP4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 RPL22L1Q6P5R6 122 aaKnown RBP4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 CBR4Q8N4T8 237 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 ZNF491Q8N8L2 437 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 ZNF485Q8NCK3 441 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 UBALD1Q8TB05 177 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 CCDC107Q8WV48 283 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 APH1BQ8WW43 257 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 TMEM106AQ96A25 262 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 KCTD7Q96MP8 289 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 Q96MT0 163 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 GPER1Q99527 375 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 LYSTQ99698 3801 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 SLC29A1Q99808 456 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 RASL11BQ9BPW5 248 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 ING4Q9UNL4 249 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 RPL36Q9Y3U8 105 aaKnown RBP4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 ORC6Q9Y5N6 252 aa4.92□□□□□ -1.62
PRPF40A-210ENST00000489741 TRBV5-7A0A0A0MS05 114 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 IGHV3-43A0A0B4J1X8 118 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 LOC100130705A0A1B0GUX0 176 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 SEC14L6B5MCN3 397 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 SDCBPO00560 298 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 TXNL1O43396 289 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 LANCL1O43813 399 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 ZNF780AO75290 641 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 LALBAP00709 142 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 GLAP06280 429 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms