RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 CRYGDP07320 174 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 HIST1H1CP16403 213 aaKnown RBP0.95□□□□□ -2.26
CPSF3-205ENST00000489629 F8A1P23610 371 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 PPP1CCP36873 323 aaKnown RBP0.95□□□□□ -2.26
CPSF3-205ENST00000489629 HSPA9P38646 679 aaKnown RBP0.95□□□□□ -2.26
CPSF3-205ENST00000489629 MAGEA2P43356 314 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 BLVRAP53004 296 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 MLLT11Q13015 90 aaPredicted RBP0.95□□□□□ -2.26
CPSF3-205ENST00000489629 LCN8Q6JVE9 175 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 ATP5L2Q7Z4Y8 100 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 SLC13A5Q86YT5 568 aaPredicted RBP0.95□□□□□ -2.26
CPSF3-205ENST00000489629 ZNF567Q8N184 647 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 PACRGLQ8N7B6 248 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 OR52E4Q8NGH9 312 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 OR2V1Q8NHB1 315 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 OR5K1Q8NHB7 308 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 PHOSPHO2Q8TCD6 241 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 CD200R1Q8TD46 325 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 DTD1Q8TEA8 209 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 ASB13Q8WXK3 278 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 HIST1H2BAQ96A08 127 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 PPWD1Q96BP3 646 aaKnown RBP0.95□□□□□ -2.26
CPSF3-205ENST00000489629 GALMQ96C23 342 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 ACY3Q96HD9 319 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 C20orf166-AS1Q96NR2 134 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 OR8B2Q96RD0 313 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 EBNA1BP2Q99848 306 aaKnown RBP0.95□□□□□ -2.26
CPSF3-205ENST00000489629 HDHD2Q9H0R4 259 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 METTL9Q9H1A3 318 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 PARVAQ9NVD7 372 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 FAM206AQ9NX38 181 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 PSMD13Q9UNM6 376 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 WASHC3Q9Y3C0 194 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 SCN9AQ15858 1988 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 PLCH2O75038 1416 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 RIMS2Q9UQ26 1411 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 STRCP1A6NGW2 1772 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 ERCC6L2Q5T890 1561 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 GBF1Q92538 1859 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 TENM1Q9UKZ4 2725 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 SRCAPQ6ZRS2 3230 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 EVPLLA8MZ36 301 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 G3V3Q6 166 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 H3BSA7 217 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 MRASO14807 208 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 NIPSNAP2O75323 286 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 SOD1P00441 154 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 IGLV3-27P01718 113 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 HBZP02008 142 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 TYMSP04818 313 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 CDK2P24941 298 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 MIPP30301 263 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 OR1E2P47887 323 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 REG1BP48304 166 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 H2BFSP57053 126 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 FGF12P61328 243 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 HERVK_113P63121 156 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 PSG4Q00888 419 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 MGAT3Q09327 533 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 PPP1R1AQ13522 171 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 JOSD1Q15040 202 aaPredicted RBP0.94□□□□□ -2.26
CPSF3-205ENST00000489629 CST6Q15828 149 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 SAPCD1Q5SSQ6 148 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 ZBTB8OSQ8IWT0 167 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 C1orf174Q8IYL3 243 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 MFSD8Q8NHS3 518 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 HAVCR2Q8TDQ0 301 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 RNASE6Q93091 150 aaKnown RBP0.94□□□□□ -2.26
CPSF3-205ENST00000489629 CMTM5Q96DZ9 223 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 PACRGQ96M98 296 aaPredicted RBP0.94□□□□□ -2.26
CPSF3-205ENST00000489629 KCTD7Q96MP8 289 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 STACQ99469 402 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 UPK3BQ9BT76 320 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 OR51B6Q9H340 312 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 UBQLN4Q9NRR5 601 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 GLS2Q9UI32 602 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 HDGFL3Q9Y3E1 203 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 NPATQ14207 1427 aa0.94□□□□□ -2.26
CPSF3-205ENST00000489629 TMED7-TICAM2A0A0A6YYA0 188 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MDFIC2A0A1B0GVS7 189 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 VPS37CA5D8V6 355 aaPredicted RBP0.93□□□□□ -2.26
CPSF3-205ENST00000489629 H0Y980 276 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 M0R381 172 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 DEXIO95424 95 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 PSMG1O95456 288 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 LINC00614P0C842 121 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 IGHV3-30-3P0DP02 117 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 CBR1P16152 277 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 CRYBB3P26998 211 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 CRABP1P29762 137 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 CDK9P50750 372 aaKnown RBP0.93□□□□□ -2.26
CPSF3-205ENST00000489629 TSPEAR-AS2P59090 65 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MYL6P60660 151 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 CXCR4P61073 352 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 DAD1P61803 113 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 HTR4Q13639 388 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 PDK2Q15119 407 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MAPK14Q16539 360 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 CLEC12BQ2HXU8 276 aa0.93□□□□□ -2.26
CPSF3-205ENST00000489629 MRPL51Q4U2R6 128 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms