RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 RFNGQ9Y644 331 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 CST7O76096 145 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 CHRNB4P30926 498 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 RAB2AP61019 212 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 RPS23P62266 143 aaKnown RBP15.46■□□□□ 0.07
COL16A1-215ENST00000488897 AKR1C8PQ5T2L2 129 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 DPPA3Q6W0C5 159 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 RBMS3Q6XE24 437 aaKnown RBP15.46■□□□□ 0.07
COL16A1-215ENST00000488897 Q6ZT83 130 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 S100PBPQ96BU1 408 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 ZNF251Q9BRH9 671 aa15.46■□□□□ 0.07
COL16A1-215ENST00000488897 PKDREJQ9NTG1 2253 aa15.46■□□□□ 0.06
COL16A1-215ENST00000488897 IGKV1-6A0A0C4DH72 117 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 J3QKU1 62 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 PGLYRP1O75594 196 aaPredicted RBP15.45■□□□□ 0.06
COL16A1-215ENST00000488897 HBE1P02100 147 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 CCL2P13500 99 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 COL8A1P27658 744 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 TLE4Q04727 773 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 HIST2H2BCQ6DN03 193 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 ODF3L1Q8IXM7 274 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 TCTEX1D2Q8WW35 142 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 RBMXL1Q96E39 390 aaKnown RBP15.45■□□□□ 0.06
COL16A1-215ENST00000488897 HIPK2Q9H2X6 1198 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 TRBV6-6A0A0A6YYG2 114 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 TMEM50AO95807 157 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 SRP19P09132 144 aaKnown RBP15.45■□□□□ 0.06
COL16A1-215ENST00000488897 SP5Q6BEB4 398 aaPredicted RBP15.45■□□□□ 0.06
COL16A1-215ENST00000488897 MYPOPQ86VE0 399 aaPredicted RBP15.45■□□□□ 0.06
COL16A1-215ENST00000488897 TMEM217Q8N7C4 229 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 ATP5SQ99766 215 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 OPA3Q9H6K4 179 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 CRIM1Q9NZV1 1036 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 IL36RNQ9UBH0 155 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 VPS13CQ709C8 3753 aa15.45■□□□□ 0.06
COL16A1-215ENST00000488897 ABCA4P78363 2273 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 AP4M1O00189 453 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 HSPB6O14558 160 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 HSPB1P04792 205 aaKnown RBP15.44■□□□□ 0.06
COL16A1-215ENST00000488897 F2RP25116 425 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 YPEL4Q96NS1 127 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 GPHA2Q96T91 129 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 RNF115Q9Y4L5 304 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 H3BQ15 152 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 DFFBO76075 338 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 SLC25A6P12236 298 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 ARR3P36575 388 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 OR2B8PP59922 312 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 SLC16A13Q7RTY0 426 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 STX12Q86Y82 276 aa15.44■□□□□ 0.06
COL16A1-215ENST00000488897 MRPL30Q8TCC3 161 aaKnown RBP15.44■□□□□ 0.06
COL16A1-215ENST00000488897 A0A1B0GU03 582 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 CELA3BP08861 270 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 TAS2R30P59541 319 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 HAGHQ16775 308 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 ZNF506Q5JVG8 444 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 HEPN1Q6WQI6 88 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 JKAMPQ9P055 326 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 TAAR3PQ9P1P4 343 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 OR2W1Q9Y3N9 320 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 MAP1AP78559 2803 aaPredicted RBP15.43■□□□□ 0.06
COL16A1-215ENST00000488897 ANKHD1Q8IWZ3 2542 aaKnown RBP15.43■□□□□ 0.06
COL16A1-215ENST00000488897 HECTD1Q9ULT8 2610 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 AKAP6Q13023 2319 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 A0A087WWC5 75 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 SCAF4O95104 1147 aaKnown RBP15.43■□□□□ 0.06
COL16A1-215ENST00000488897 PAX9P55771 341 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 RPL23AP62750 156 aaKnown RBP15.43■□□□□ 0.06
COL16A1-215ENST00000488897 ZNF154Q13106 437 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 OR10J5Q8NHC4 309 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 MUCL1Q96DR8 90 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 GP6Q9HCN6 339 aa15.43■□□□□ 0.06
COL16A1-215ENST00000488897 CD300LBA8K4G0 201 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 TNFSF12O43508 249 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 SYNGR1O43759 233 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 OR8U8P0C7N1 319 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 NQO2P16083 231 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 UBE2KP61086 200 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 TFF3Q07654 80 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 GABRA6Q16445 453 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 ZNF573Q86YE8 665 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 IFNA5P01569 189 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 EPHA1P21709 976 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 TAGLN2P37802 199 aaKnown RBP15.42■□□□□ 0.06
COL16A1-215ENST00000488897 RUNX1Q01196 453 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 PLP2Q04941 152 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 ICAM4Q14773 271 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 BEND4Q6ZU67 534 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 OR1K1Q8NGR3 316 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 OR5P3Q8WZ94 311 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 RAB39BQ96DA2 213 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 WFIKKN1Q96NZ8 548 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 RAB40CQ96S21 281 aa15.42■□□□□ 0.06
COL16A1-215ENST00000488897 FBN2P35556 2912 aa15.41■□□□□ 0.06
COL16A1-215ENST00000488897 LRP5LA4QPB2 252 aa15.41■□□□□ 0.06
COL16A1-215ENST00000488897 ANKRD30BLA7E2S9 258 aa15.41■□□□□ 0.06
COL16A1-215ENST00000488897 SERPINE2P07093 398 aa15.41■□□□□ 0.06
COL16A1-215ENST00000488897 WNT2P09544 360 aa15.41■□□□□ 0.06
COL16A1-215ENST00000488897 ZNF880Q6PDB4 577 aa15.41■□□□□ 0.06
COL16A1-215ENST00000488897 BHLHA15Q7RTS1 189 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms