RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RPS11P62280 158 aaKnown RBP eCLIP2.09□□□□□ -2.07
ITGB1-214ENST00000488427 HMGN5P82970 282 aaKnown RBP2.09□□□□□ -2.07
ITGB1-214ENST00000488427 PRKCDQ05655 676 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 TRAM2Q15035 370 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 EBPQ15125 230 aaKnown RBP2.09□□□□□ -2.07
ITGB1-214ENST00000488427 GABRA6Q16445 453 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 CCSMST1Q4G0I0 132 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 SOHLH1Q5JUK2 328 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 CA13Q8N1Q1 262 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 C17orf78Q8N4C9 275 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 SPICQ8N5J4 248 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 WDR31Q8NA23 367 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 OR10AD1Q8NGE0 317 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 OR5M1Q8NGP8 315 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 OR51E1Q8TCB6 317 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 ZNF317Q96PQ6 595 aaPredicted RBP2.09□□□□□ -2.07
ITGB1-214ENST00000488427 NABP2Q9BQ15 211 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 GGTLC1Q9BX51 225 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 WFDC1Q9HC57 220 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 RETNQ9HD89 108 aa2.09□□□□□ -2.07
ITGB1-214ENST00000488427 CAB39Q9Y376 341 aaPredicted RBP2.09□□□□□ -2.07
ITGB1-214ENST00000488427 DNAH5Q8TE73 4624 aa2.09□□□□□ -2.08
ITGB1-214ENST00000488427 TRBV9A0A0B4J1U6 114 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 SEC14L6B5MCN3 397 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 TNFRSF11BO00300 401 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 LSM1O15116 133 aaKnown RBP2.08□□□□□ -2.08
ITGB1-214ENST00000488427 CTNSO60931 367 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 BRI3O95415 125 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 TSPAN13O95857 204 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 OTCP00480 354 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 IGHV1-69P01742 117 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 MYL9P24844 172 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 IDH2P48735 452 aaKnown RBP2.08□□□□□ -2.08
ITGB1-214ENST00000488427 MRPL19P49406 292 aaKnown RBP2.08□□□□□ -2.08
ITGB1-214ENST00000488427 RAB38P57729 211 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 CCL8P80075 99 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 IL15RAQ13261 267 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 MAD2L1BPQ15013 274 aaPredicted RBP2.08□□□□□ -2.08
ITGB1-214ENST00000488427 TMED2Q15363 201 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 FAM27D1Q5T7N8 215 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 HBMQ6B0K9 141 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 TMPRSS11AQ6ZMR5 421 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 MDP1Q86V88 176 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 CMTM1Q8IZ96 169 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 OR4K2Q8NGD2 314 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 OR2V1Q8NHB1 315 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 AKR7LQ8NHP1 331 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 ACMSDQ8TDX5 336 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 SKA2Q8WVK7 121 aaPredicted RBP2.08□□□□□ -2.08
ITGB1-214ENST00000488427 HAUS1Q96CS2 278 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 TVP23CQ96ET8 276 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 SNRNP25Q9BV90 132 aaKnown RBP2.08□□□□□ -2.08
ITGB1-214ENST00000488427 MTCH1Q9NZJ7 389 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 MTFP1Q9UDX5 166 aa2.08□□□□□ -2.08
ITGB1-214ENST00000488427 TRIM64CA6NLI5 447 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 NDUFC2-KCTD14E9PQ53 114 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 M0R2N4 97 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 AP3B1O00203 1094 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 SYNGR1O43759 233 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 SCO1O75880 301 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 LSM8O95777 96 aaKnown RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 HPRT1P00492 218 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 KRT14P02533 472 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 CECR9P0C854 216 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 MYL2P10916 166 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 CALRP27797 417 aaKnown RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 GTF2E2P29084 291 aaKnown RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 CCR7P32248 378 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 GDI2P50395 445 aaKnown RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 CCNG1P51959 295 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 XIAPP98170 497 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 IFITM3Q01628 133 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 PNOCQ13519 176 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 TRIP13Q15645 432 aaPredicted RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 Q8N2B8 174 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 GTPBP8Q8N3Z3 284 aaPredicted RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 SLC35G3Q8N808 338 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 ZFP41Q8N8Y5 198 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 OR5T1Q8NG75 326 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 OR4X2Q8NGF9 303 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 CLHC1Q8NHS4 586 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 CCL17Q92583 94 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 HGDQ93099 445 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 CPNE4Q96A23 557 aaPredicted RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 IMP4Q96G21 291 aaKnown RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 DUS3LQ96G46 650 aaKnown RBP2.07□□□□□ -2.08
ITGB1-214ENST00000488427 DSN1Q9H410 356 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 TREX1Q9NSU2 369 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 PITPNC1Q9UKF7 332 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 ARL5AQ9Y689 179 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 SAR1BQ9Y6B6 198 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 FAT3Q8TDW7 4589 aa2.07□□□□□ -2.08
ITGB1-214ENST00000488427 IGHV3-72A0A0B4J1Y9 119 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 IGHV3OR16-9A0A0B4J2B5 98 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 A0A0J9YW62 118 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 A0A0J9YXV3 536 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 CENPBD1B2RD01 187 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 H3BUX3 64 aa2.06□□□□□ -2.08
ITGB1-214ENST00000488427 KCNK1O00180 336 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms