RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 HMGN3Q15651 99 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 C1orf100Q5SVJ3 147 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 FAM27D1Q5T7N8 215 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 GLT8D1Q68CQ7 371 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 AHSA2Q719I0 299 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 C6orf201Q7Z4U5 140 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 KCNG3Q8TAE7 436 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 IL1F10Q8WWZ1 152 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 GHITMQ9H3K2 345 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 SMAD5-AS1Q9Y6J3 95 aa11.88□□□□□ -0.51
TRIM50-203ENST00000488217 FCN1O00602 326 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 OVOL1O14753 267 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 DENRO43583 198 aaKnown RBP11.87□□□□□ -0.51
TRIM50-203ENST00000488217 NDUFA3O95167 84 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 LY86O95711 162 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 CD37P11049 281 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 SRMP19623 302 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 MC5RP33032 325 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 CX3CL1P78423 397 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 TMEM267Q0VDI3 215 aaPredicted RBP11.87□□□□□ -0.51
TRIM50-203ENST00000488217 FAM71F2Q6NXP2 309 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 LRRTM1Q86UE6 522 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 PHYHIPQ92561 330 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 CNBD2Q96M20 576 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 IFI27L2Q9H2X8 130 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 SLC23A1Q9UHI7 598 aa11.87□□□□□ -0.51
TRIM50-203ENST00000488217 C3orf84H3BNL1 204 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 RRHO14718 337 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 ST8SIA5O15466 376 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 NAPSAO96009 420 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 GSTP1P09211 210 aaKnown RBP11.86□□□□□ -0.51
TRIM50-203ENST00000488217 EGR2P11161 476 aaPredicted RBP11.86□□□□□ -0.51
TRIM50-203ENST00000488217 CEACAM6P40199 344 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 RNLSQ5VYX0 342 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 ZNF880Q6PDB4 577 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 CEACAM19Q7Z692 300 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 DLX4Q92988 240 aaPredicted RBP11.86□□□□□ -0.51
TRIM50-203ENST00000488217 RNF5Q99942 180 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 TM2D1Q9BX74 207 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 TOLLIPQ9H0E2 274 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
TRIM50-203ENST00000488217 FBXL15Q9H469 300 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 Q9H521 79 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 CHMP1AQ9HD42 196 aaPredicted RBP11.86□□□□□ -0.51
TRIM50-203ENST00000488217 PLEKHJ1Q9NW61 149 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 FKBP14Q9NWM8 211 aa11.86□□□□□ -0.51
TRIM50-203ENST00000488217 A0A1W2PN81 502 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 ITGB1BP1O14713 200 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 SOX15O60248 233 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 CHRNA7P36544 502 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 QRFPP83859 136 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 RPL39P5Q59GN2 51 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 C19orf54Q5BKX5 351 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 CD200R1LQ6Q8B3 271 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 FAM131AQ6UXB0 335 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 SVOPQ8N4V2 548 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 TCTEX1D1Q8N7M0 179 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 SETD6Q8TBK2 473 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 ABHD14BQ96IU4 210 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 AGMATQ9BSE5 352 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 TMED9Q9BVK6 235 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 TMEM59Q9BXS4 323 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
TRIM50-203ENST00000488217 TPSG1Q9NRR2 321 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
TRIM50-203ENST00000488217 FBXO7Q9Y3I1 522 aa11.85□□□□□ -0.51
TRIM50-203ENST00000488217 OR5H14A6NHG9 310 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 TMEM14DPA8MWL7 114 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 PTGES3LE9PB15 166 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 LINC01619G3V211 115 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 H7C2Y5 167 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 SLC22A1O15245 554 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 SAP30O75446 220 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 CDK1P06493 297 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 CRIP2P52943 208 aaPredicted RBP11.84□□□□□ -0.51
TRIM50-203ENST00000488217 UNC119Q13432 240 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 PLGLAQ15195 96 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 ECSCRQ19T08 205 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 HSD17B12Q53GQ0 312 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 AKIRIN2Q53H80 203 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 ZNF562Q6V9R5 426 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
TRIM50-203ENST00000488217 PPP1R27Q86WC6 154 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 SBSPONQ8IVN8 264 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 OR5AN1Q8NGI8 311 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 CASTOR1Q8WTX7 329 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 NICN1Q9BSH3 213 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 MND1Q9BWT6 205 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 C11orf54Q9H0W9 315 aaPredicted RBP11.84□□□□□ -0.51
TRIM50-203ENST00000488217 RNF150Q9ULK6 438 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 A3GALT2U3KPV4 340 aa11.84□□□□□ -0.51
TRIM50-203ENST00000488217 TRBV6-6A0A0A6YYG2 114 aa11.83□□□□□ -0.52
TRIM50-203ENST00000488217 H0YJW9 148 aa11.83□□□□□ -0.52
TRIM50-203ENST00000488217 RBBP9O75884 186 aa11.83□□□□□ -0.52
TRIM50-203ENST00000488217 BPNT1O95861 308 aa11.83□□□□□ -0.52
TRIM50-203ENST00000488217 HSPB1P04792 205 aaKnown RBP11.83□□□□□ -0.52
TRIM50-203ENST00000488217 SPNP16150 400 aa11.83□□□□□ -0.52
TRIM50-203ENST00000488217 ZBTB25P24278 435 aa11.83□□□□□ -0.52
TRIM50-203ENST00000488217 CD40LGP29965 261 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms