RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 MYBPHLA2RUH7 354 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 FABP12A6NFH5 140 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 RFPL4AA6NLU0 287 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 TRPC5OSA6NMA1 111 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 E7EWF7 191 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 F5H5P2 479 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 RFPL4AL1F8VTS6 287 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 MKRN2OSH3BPM6 223 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 PFDN6O15212 129 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ACOX3O15254 700 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 GYG2O15488 501 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 DENRO43583 198 aaKnown RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 ZNF73O43830 326 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 COX7A2P2O60397 106 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 NOS1APO75052 506 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 ADAP1O75689 374 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 SULT1C4O75897 302 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 LYPLA2O95372 231 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 DEXIO95424 95 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 AHSA1O95433 338 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ASS1P00966 412 aaKnown RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 IFNGP01579 166 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 TRBC1P01850 177 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 APOC1P02654 83 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 LINC00614P0C842 121 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 SLC35E2BP0CK96 405 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 CTLA4P16410 223 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ZNF7P17097 686 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 PTNP21246 168 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 HTR2CP28335 458 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ARR3P36575 388 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 NUP62P37198 522 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 KCNJ3P48549 501 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 RAB13P51153 203 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 GNG2P59768 71 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 PSME3P61289 254 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 LSM6P62312 80 aaKnown RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 TPBGQ13641 420 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 APOFQ13790 326 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 TRIP13Q15645 432 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 EXOC3L4Q17RC7 722 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 GOLGA7BQ2TAP0 167 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 CEACAM16Q2WEN9 425 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 C18orf21Q32NC0 220 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 UBE2NLQ5JXB2 153 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 IDNKQ5T6J7 187 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 SYPL2Q5VXT5 272 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 RESP18Q5W5W9 173 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 C3orf33Q6P1S2 294 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 SCIMPQ6UWF3 145 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 Q6ZQT7 251 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 S100A7AQ86SG5 101 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 LYG2Q86SG7 212 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 MARCH3Q86UD3 253 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 TMEM25Q86YD3 366 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 PHF13Q86YI8 300 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 MSRB3Q8IXL7 192 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 CA13Q8N1Q1 262 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 RPRMLQ8N4K4 120 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 C3orf22Q8N5N4 141 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 C2orf73Q8N5S3 287 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 C12orf29Q8N999 325 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 Q8NAQ8 132 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 OR8A1Q8NGG7 326 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 NAT14Q8WUY8 206 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 MITD1Q8WV92 249 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 KCTD4Q8WVF5 259 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 DNAJB3Q8WWF6 145 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 MAL2Q969L2 176 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 APOBEC3DQ96AK3 386 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 TAMM41Q96BW9 452 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 FMC1Q96HJ9 113 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ADTRPQ96IZ2 230 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 YPEL4Q96NS1 127 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 TRIB3Q96RU7 358 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 HOPXQ9BPY8 73 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 SLC19A3Q9BZV2 496 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 SLC22A4Q9H015 551 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 HDHD2Q9H0R4 259 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 RAB1BQ9H0U4 201 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 METTL9Q9H1A3 318 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 GAL3ST2Q9H3Q3 398 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 C11orf49Q9H6J7 331 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 METTL8Q9H825 291 aaKnown RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 GID8Q9NWU2 228 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 FBXL3Q9UKT7 428 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 TBL2Q9Y4P3 447 aaKnown RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 ASB4Q9Y574 426 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 OR51B4Q9Y5P0 310 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 U3KQK5 164 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 V9GYY9 64 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 CFAP74Q9C0B2 1584 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 HECW2Q9P2P5 1572 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 DOCK1Q14185 1865 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 NUP210Q8TEM1 1887 aaPredicted RBP0.81□□□□□ -2.28
SMC4-220ENST00000488017 IQGAP3Q86VI3 1631 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ABCA6Q8N139 1617 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ANAPC1Q9H1A4 1944 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 CASP8AP2Q9UKL3 1982 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 MROH2AA6NES4 1674 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms