RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 ZNF726A6NNF4 738 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 LINC00587B1AMM8 73 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SRRM5B3KS81 715 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 LOC110117498-PIK3R3F6TDL0 507 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 hCG_2039718K7EN88 272 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 FAAHO00519 579 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 PPP1R2P9O14990 202 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CD5LO43866 347 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 OR2T1O43869 369 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 NOS1APO75052 506 aaPredicted RBP2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CRLF1O75462 422 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SERPINB7O75635 380 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SC5DO75845 299 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 RAB36O95755 333 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 IGHV3-13P01766 116 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 IGHV2-5P01817 119 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 HLA-HP01893 362 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 OPN1SWP03999 348 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 GUSBP08236 651 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CSF3P09919 207 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 OR4A8P0C604 315 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SLC2A1P11166 492 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SLC25A16P16260 332 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 USF1P22415 310 aaPredicted RBP2.51□□□□□ -2.01
GPNMB-212ENST00000487890 MAS1LP35410 378 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 MAGEA2P43356 314 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 YAP1P46937 504 aaKnown RBP2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CSNK1A1P48729 337 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 EFNA4P52798 201 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 MTPNP58546 118 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 UBE2KP61086 200 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 H3F3AP84243 136 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 PITPNAQ00169 270 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CDK6Q00534 326 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 MS4A2Q01362 244 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 DYNC1I2Q13409 638 aaKnown RBP2.51□□□□□ -2.01
GPNMB-212ENST00000487890 ARL6IP1Q15041 203 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SLC9A3R2Q15599 337 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 OR1Q1Q15612 314 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 TNXAQ16473 311 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 LRRC36Q1X8D7 754 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CEACAM16Q2WEN9 425 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 TMEM249Q2WGJ8 235 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 TRMT5Q32P41 509 aaKnown RBP2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CCDC58Q4VC31 144 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 C14orf177Q52M58 125 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 PAN3Q58A45 887 aaKnown RBP2.51□□□□□ -2.01
GPNMB-212ENST00000487890 TNFAIP8L3Q5GJ75 292 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 OR2B11Q5JQS5 317 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 PAGE3Q5JUK9 113 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 C6orf52Q5T4I8 152 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 C11orf71Q6IPW1 123 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF544Q6NX49 715 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 EPGNQ6UW88 154 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 C5orf46Q6UWT4 87 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF497Q6ZNH5 498 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 DNM1P46Q6ZS02 220 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 MDP1Q86V88 176 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SKA3Q8IX90 412 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 HS3ST5Q8IZT8 346 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 KIR2DL5AQ8N109 375 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 C6orf223Q8N319 242 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 ZIC4Q8N9L1 334 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 OR4F15Q8NGB8 312 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 OR10J5Q8NHC4 309 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 KIR2DL5BQ8NHK3 375 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 MFSD8Q8NHS3 518 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CHCHD10Q8WYQ3 142 aaPredicted RBP2.51□□□□□ -2.01
GPNMB-212ENST00000487890 AP3S1Q92572 193 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CREB3L1Q96BA8 519 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SLC25A38Q96DW6 304 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 VSIG2Q96IQ7 327 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF251Q9BRH9 671 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 EMC6Q9BV81 110 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 KRTAP17-1Q9BYP8 105 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 ULBP2Q9BZM5 246 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 CA10Q9NS85 328 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 MED29Q9NX70 200 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 SLC25A37Q9NYZ2 338 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 VAPAQ9P0L0 249 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF581Q9P0T4 197 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 FAM32AQ9Y421 112 aaKnown RBP2.51□□□□□ -2.01
GPNMB-212ENST00000487890 PKD1L1Q8TDX9 2849 aa2.51□□□□□ -2.01
GPNMB-212ENST00000487890 TANC2Q9HCD6 1990 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 MGAM2Q2M2H8 2515 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 IGKV1D-42A0A075B6H8 117 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 IGHV1OR15-1A0A075B7D0 117 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 A0A087WUJ7 227 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 A0A0B4J2E0 115 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 A0A1B0GX12 115 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 A0A1W2PRG6 482 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 TRAPPC13A5PLN9 417 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF98A6NK75 572 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF729A6NN14 1252 aaPredicted RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 RNASEK-C17orf49H0YIS7 233 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 H7C417 338 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 M0R233 179 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 PLPP3O14495 311 aa2.5□□□□□ -2.01
GPNMB-212ENST00000487890 TRAF3IP2O43734 574 aaPredicted RBP2.5□□□□□ -2.01
GPNMB-212ENST00000487890 AIREO43918 545 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms