RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 CXCR4P61073 352 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 PSME3P61289 254 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 SPCS2Q15005 226 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 IGFBP7Q16270 282 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 CCL15Q16663 113 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 ZNF678Q5SXM1 525 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 SYPL2Q5VXT5 272 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 TAC4Q86UU9 113 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 CYP4Z2PQ8N1L4 340 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 GAPTQ8N292 157 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 TMEM105Q8N8V8 129 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 TTLQ8NG68 377 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 OR11H7Q8NGC8 314 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 OR8J2Q8NGG1 315 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 OR5AK3PQ8NH89 298 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 RNASEH2CQ8TDP1 164 aaKnown RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 RMND5BQ96G75 393 aaPredicted RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 DCUN1D1Q96GG9 259 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 LYSMD1Q96S90 227 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 KLF6Q99612 283 aaPredicted RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 CGREF1Q99674 301 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 C20orf27Q9GZN8 174 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 RDH14Q9HBH5 336 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 EXOSC4Q9NPD3 245 aaKnown RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 ASCL3Q9NQ33 180 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 IFT46Q9NQC8 304 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 SDHAF3Q9NRP4 125 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 HEBP1Q9NRV9 189 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 USE1Q9NZ43 259 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 RSL24D1Q9UHA3 163 aaKnown RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 STOML2Q9UJZ1 356 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 FBXO5Q9UKT4 447 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 CBY1Q9Y3M2 126 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 PLXNA4Q9HCM2 1894 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 NUP205Q92621 2012 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 FAM240AA0A1B0GVK7 77 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 DHRS12A0PJE2 317 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 MYBPHLA2RUH7 354 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 ARL5CA6NH57 179 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 FXYD1O00168 92 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 KCNK1O00180 336 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 TNFRSF11BO00300 401 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 SULT1C2O00338 296 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 MRASO14807 208 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 SYNGR1O43759 233 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 ADAP1O75689 374 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 SEMA3DO95025 777 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 IGKV1D-16P01601 117 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 IL6P05231 212 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 HLA-DQB2P05538 268 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 GIMD1P0DJR0 217 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 PSKH1P11801 424 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 CYBAP13498 195 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 PPIBP23284 216 aaKnown RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 MAGEA2P43356 314 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 HAAOP46952 286 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 TUFMP49411 452 aaKnown RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 CDC34P49427 236 aaPredicted RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 ZNF140P52738 457 aaPredicted RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 TMBIM6P55061 237 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 AP1S1P61966 158 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 EMX2Q04743 252 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 PRKCDQ05655 676 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 STX4Q12846 297 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 RAB31Q13636 194 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 ZNF235Q14590 738 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 TAF1AQ15573 450 aaPredicted RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 ZNHIT3Q15649 155 aaPredicted RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 RGS21Q2M5E4 152 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 RNASE13Q5GAN3 156 aaKnown RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 IDNKQ5T6J7 187 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 SYT6Q5T7P8 510 aaPredicted RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 KDM4DQ6B0I6 523 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 THOC7Q6I9Y2 204 aaKnown RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 NIPAL1Q6NVV3 410 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 ZCCHC23Q6ZST2 131 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 DHFR2Q86XF0 187 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 FUNDC1Q8IVP5 155 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 SLC30A8Q8IWU4 369 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 TMEM156Q8N614 296 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 NATD1Q8N6N6 113 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 ST20-AS1Q8NBB2 130 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 UBAC2Q8NBM4 344 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 OR51Q1Q8NH59 317 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 SFXN5Q8TD22 340 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 RAB2BQ8WUD1 216 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 KCTD4Q8WVF5 259 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 PYDC1Q8WXC3 89 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 CDS1Q92903 461 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 SLC35B4Q969S0 331 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 CEP19Q96LK0 163 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 PPP3R2Q96LZ3 170 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 OR52B2Q96RD2 323 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 UGT2B28Q9BY64 529 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 YIPF3Q9GZM5 350 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 GABARAPL1Q9H0R8 117 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 POMKQ9H5K3 350 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 MYOZ1Q9NP98 299 aaPredicted RBP1.95□□□□□ -2.1
TTC3-220ENST00000487711 C8orf17Q9NRJ1 99 aa1.95□□□□□ -2.1
TTC3-220ENST00000487711 RBM22Q9NW64 420 aaKnown RBP eCLIP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms