RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TUSC2O75896 110 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 FCER2P06734 321 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 TBPP20226 339 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 HLA-DMAP28067 261 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 DYRK1AQ13627 763 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 ACTBL2Q562R1 376 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 FAM71F2Q6NXP2 309 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 ODF3L1Q8IXM7 274 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 OR8H3Q8N146 312 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 TMEM86BQ8N661 226 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 TMEM229BQ8NBD8 167 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 SSMEM1Q8WWF3 244 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 TOMM40LQ969M1 308 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 THAP7Q9BT49 309 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-207ENST00000487645 PARP12Q9H0J9 701 aaKnown RBP10.75□□□□□ -0.69
COL4A6-207ENST00000487645 OR2W1Q9Y3N9 320 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 POMT1Q9Y6A1 747 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF736B4DX44 427 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-207ENST00000487645 HSD17B6O14756 317 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 ST8SIA5O15466 376 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 TXNL1O43396 289 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 SLC22A5O76082 557 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 PMP2P02689 132 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 CSF1P09603 554 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 OR8U9P0C7N5 309 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 NFYAP23511 347 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-207ENST00000487645 FCGR2CP31995 323 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 BRS3P32247 399 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 HRH1P35367 487 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 RFX2P48378 723 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 LUMP51884 338 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-207ENST00000487645 TAS2R19P59542 299 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 HILS1P60008 231 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 BAMBIQ13145 260 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF79Q15937 498 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 LRRC75BQ2VPJ9 315 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 RNASE12Q5GAN4 147 aaKnown RBP10.74□□□□□ -0.69
COL4A6-207ENST00000487645 VAX1Q5SQQ9 334 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 Q8N402 240 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 GDPD1Q8N9F7 314 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-207ENST00000487645 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 OR5R1Q8NH85 324 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 RTN4IP1Q8WWV3 396 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-207ENST00000487645 S1PR3Q99500 378 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 SSX3Q99909 188 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 IFI27L2Q9H2X8 130 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 EHFQ9NZC4 300 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF221Q9UK13 617 aa10.74□□□□□ -0.69
COL4A6-207ENST00000487645 RBM7Q9Y580 266 aaKnown RBP10.74□□□□□ -0.69
COL4A6-207ENST00000487645 CLDN34H7C241 214 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 CD74P04233 296 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 GPR12P47775 334 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF660Q6AZW8 331 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 THNSL2Q86YJ6 484 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 TGIF2LXQ8IUE1 241 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 OR6F1Q8NGZ6 308 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 PIFOQ8TCI5 191 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 S100ZQ8WXG8 99 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 ABHD14BQ96IU4 210 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF251Q9BRH9 671 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 SRRQ9GZT4 340 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 ABCB10Q9NRK6 738 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 RNF150Q9ULK6 438 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 JMJD1CQ15652 2540 aa10.73□□□□□ -0.69
COL4A6-207ENST00000487645 CUBNO60494 3623 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 SAA2-SAA4A0A096LPE2 208 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 IGHV1-3A0A0C4DH29 117 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 A0A1W2PPI3 338 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 ANKRD20A5PA0PJZ0 165 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 BTBD17A6NE02 478 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 FAM90A9PA6NNJ1 464 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 HOXA3O43365 443 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-207ENST00000487645 PPYP01298 95 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 IGHV4-59P01825 116 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 CD3DP04234 171 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 IFNA6P05013 189 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 SAA2P0DJI9 122 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-207ENST00000487645 AADACP22760 399 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 PAX6P26367 422 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 TSPAN5P62079 268 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 DIAPH2-AS1Q14236 149 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 HABP2Q14520 560 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-207ENST00000487645 SLC9A3R2Q15599 337 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 PLA1AQ53H76 456 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 RNASE10Q5GAN6 216 aaKnown RBP10.72□□□□□ -0.69
COL4A6-207ENST00000487645 STEAP1BQ6NZ63 245 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 TMEM17Q86X19 198 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 ZDHHC22Q8N966 263 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 ESM1Q9NQ30 184 aa10.72□□□□□ -0.69
COL4A6-207ENST00000487645 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.69
COL4A6-207ENST00000487645 H3BUX3 64 aa10.71□□□□□ -0.69
COL4A6-207ENST00000487645 TIMM23O14925 209 aa10.71□□□□□ -0.69
COL4A6-207ENST00000487645 PROP1O75360 226 aa10.71□□□□□ -0.69
COL4A6-207ENST00000487645 VENTXO95231 258 aa10.71□□□□□ -0.69
COL4A6-207ENST00000487645 RAB3DO95716 219 aa10.71□□□□□ -0.69
COL4A6-207ENST00000487645 CD1BP29016 333 aa10.71□□□□□ -0.69
COL4A6-207ENST00000487645 REG1BP48304 166 aa10.71□□□□□ -0.69
COL4A6-207ENST00000487645 RAB13P51153 203 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms