RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 OR6Q1Q8NGQ2 317 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 OR52I2Q8NH67 350 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 EDARADDQ8WWZ3 215 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 SOSTQ9BQB4 213 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 GINS4Q9BRT9 223 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 ABHD14AQ9BUJ0 271 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 PARP12Q9H0J9 701 aaKnown RBP8.62□□□□□ -1.03
TOP3B-216ENST00000487485 C11orf54Q9H0W9 315 aaPredicted RBP8.62□□□□□ -1.03
TOP3B-216ENST00000487485 RDH8Q9NYR8 311 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 KLK11Q9UBX7 282 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 ANAPC10Q9UM13 185 aa8.62□□□□□ -1.03
TOP3B-216ENST00000487485 CTDSPLO15194 276 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 ST8SIA5O15466 376 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 HOXA3O43365 443 aaPredicted RBP8.61□□□□□ -1.03
TOP3B-216ENST00000487485 IER3P46695 156 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 RAB7AP51149 207 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 RAB13P51153 203 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 MRPS10P82664 201 aaKnown RBP8.61□□□□□ -1.03
TOP3B-216ENST00000487485 DIAPH2-AS1Q14236 149 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 CCDC190Q86UF4 302 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 LDLRAD3Q86YD5 345 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 LYSMD2Q8IV50 215 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 ODF3L1Q8IXM7 274 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 H1FOOQ8IZA3 346 aaPredicted RBP8.61□□□□□ -1.03
TOP3B-216ENST00000487485 TOMM40LQ969M1 308 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 ST6GALNAC6Q969X2 333 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 RPEQ96AT9 228 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 DUX5Q96PT3 197 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 SSX3Q99909 188 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 AGMATQ9BSE5 352 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 DPAGT1Q9H3H5 408 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 NECAP2Q9NVZ3 263 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 RNF150Q9ULK6 438 aa8.61□□□□□ -1.03
TOP3B-216ENST00000487485 DNAJC9-AS1A6NH13 148 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 OOSP1A8MZH6 123 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 H3BUX3 64 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 HSD17B6O14756 317 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 RAB29O14966 203 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 IGHV4-59P01825 116 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 PMP2P02689 132 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 GAPDHP04406 335 aaKnown RBP8.6□□□□□ -1.03
TOP3B-216ENST00000487485 OR5H8P0DN80 308 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 NFYAP23511 347 aaPredicted RBP8.6□□□□□ -1.03
TOP3B-216ENST00000487485 HLA-DMAP28067 261 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 RCVRNP35243 200 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 OR3A3P47888 321 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 RFX2P48378 723 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 TAS2R46P59540 309 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 DGCR2P98153 550 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 ZNF816Q0VGE8 651 aaPredicted RBP8.6□□□□□ -1.03
TOP3B-216ENST00000487485 CDK10Q15131 360 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 SLC9A3R2Q15599 337 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 SPANXN2Q5MJ10 180 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 SSMEM1Q8WWF3 244 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 TAF15Q92804 592 aaKnown RBP eCLIP8.6□□□□□ -1.03
TOP3B-216ENST00000487485 ABHD14BQ96IU4 210 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 IFI27L2Q9H2X8 130 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 GHITMQ9H3K2 345 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 TNFRSF19Q9NS68 423 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 PIPOXQ9P0Z9 390 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 MTFP1Q9UDX5 166 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 RBM7Q9Y580 266 aaKnown RBP8.6□□□□□ -1.03
TOP3B-216ENST00000487485 V9GYH0 126 aa8.6□□□□□ -1.03
TOP3B-216ENST00000487485 VGLL3A8MV65 326 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 J3QRK9 145 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 OR8U9P0C7N5 309 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 PTBP1P26599 531 aaKnown RBP eCLIP8.59□□□□□ -1.032e-9■■■■□ 21.1
TOP3B-216ENST00000487485 FCGR2CP31995 323 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 BRS3P32247 399 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 HRH1P35367 487 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 ETV6P41212 452 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 REG1BP48304 166 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 ARHGDIBP52566 201 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 ZNF137PP52743 207 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 ACTBP60709 375 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 SSBP1Q04837 148 aaKnown RBP8.59□□□□□ -1.03
TOP3B-216ENST00000487485 AANATQ16613 207 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 PYDC2Q56P42 97 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 CCDC144NLQ6NUI1 221 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 OVCH2Q7RTZ1 564 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 MOB3BQ86TA1 216 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 OR5H2Q8NGV7 314 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 OR8U1Q8NH10 309 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 PIFOQ8TCI5 191 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 SMIM4Q8WVI0 70 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 RTN4IP1Q8WWV3 396 aaPredicted RBP8.59□□□□□ -1.03
TOP3B-216ENST00000487485 ABCB10Q9NRK6 738 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 EHFQ9NZC4 300 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 ZNF221Q9UK13 617 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 OR2W1Q9Y3N9 320 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 POMT1Q9Y6A1 747 aa8.59□□□□□ -1.03
TOP3B-216ENST00000487485 SAA2-SAA4A0A096LPE2 208 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 IGHV1-3A0A0C4DH29 117 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 A0A1W2PPI3 338 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 BTBD17A6NE02 478 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 ZNF736B4DX44 427 aaPredicted RBP8.58□□□□□ -1.04
TOP3B-216ENST00000487485 CLDN34H7C241 214 aa8.58□□□□□ -1.04
TOP3B-216ENST00000487485 GSTZ1O43708 216 aaPredicted RBP8.58□□□□□ -1.04
TOP3B-216ENST00000487485 LANCL1O43813 399 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms