RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 OTOSQ8NHW6 89 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF420Q8TAQ5 688 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 HAVCR2Q8TDQ0 301 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 THEM6Q8WUY1 208 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ASB17Q8WXJ9 295 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 C11orf40Q8WZ69 217 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 APH1AQ96BI3 265 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 YIPF6Q96EC8 236 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 MRPL48Q96GC5 212 aaKnown RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 OPALINQ96PE5 141 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 TBX5Q99593 518 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 DOK1Q99704 481 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 BCL7BQ9BQE9 202 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 MROQ9BYG7 248 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ULBP2Q9BZM5 246 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 SIAEQ9HAT2 523 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 TMEM165Q9HC07 324 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CLCF1Q9UBD9 225 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CYB5R1Q9UHQ9 305 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 MRM2Q9UI43 246 aaKnown RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF835Q9Y2P0 537 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 NOSIPQ9Y314 301 aaKnown RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CELSR3Q9NYQ7 3312 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 FRYQ5TBA9 3013 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 MGAQ8IWI9 3026 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 PIEZO2Q9H5I5 2752 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CACNA1GO43497 2377 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 NOTCH3Q9UM47 2321 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 PRRC2CQ9Y520 2896 aaKnown RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 GTF3C1Q12789 2109 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 PHF3Q92576 2039 aaKnown RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 J3QLW9 94 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 PHOX2AO14813 284 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 AGPAT2O15120 278 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 MAGEB4O15481 346 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 AIREO43918 545 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 GABARAPO95166 117 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 CRHP06850 196 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ERCC1P07992 297 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 CST2P09228 141 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 OCM2P0CE71 109 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 OCMP0CE72 109 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 PSKH1P11801 424 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF19P17023 458 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 CELP19835 753 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 MSR1P21757 451 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 COX7A1P24310 79 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 AGTR1P30556 359 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 OTX1P32242 354 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 TGFBR2P37173 567 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 RPS27P42677 84 aaKnown RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 UQCRFS1P47985 274 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 TGM4P49221 684 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 BCAP31P51572 246 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 APOC4P55056 127 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 TAS2R43P59537 309 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ARPC4P59998 168 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 HIST1H3AP68431 136 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ARFRP1Q13795 201 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ENDOGQ14249 297 aaKnown RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 SSX1Q16384 188 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 SGCAQ16586 387 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 MOGQ16653 247 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 CEACAM16Q2WEN9 425 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 CCDC58Q4VC31 144 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 SOHLH1Q5JUK2 328 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 HIST2H3PS2Q5TEC6 136 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 GPR157Q5UAW9 335 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 C9orf135Q5VTT2 229 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 OTPQ5XKR4 325 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 FBXW9Q5XUX1 488 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 CD200R1LQ6Q8B3 271 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 LRRN1Q6UXK5 716 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 HIST2H3AQ71DI3 136 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 DCXRQ7Z4W1 244 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ABHD12BQ7Z5M8 362 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 MYPOPQ86VE0 399 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 P2RY8Q86VZ1 359 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 PUSL1Q8N0Z8 303 aaKnown RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 CEND1Q8N111 149 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 SLC22A24Q8N4F4 322 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 COMMD1Q8N668 190 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 YIPF7Q8N8F6 280 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 OR4A4PQ8NGN8 299 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 OR6K3Q8NGY3 331 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 FAM57AQ8TBR7 257 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 RPS4Y2Q8TD47 263 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 RAB2BQ8WUD1 216 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 RNF133Q8WVZ7 376 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 C12orf43Q96C57 262 aaKnown RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ISOC1Q96CN7 298 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 SLAMF6Q96DU3 332 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ZFP3Q96NJ6 502 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 AMELYQ99218 206 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 NAA50Q9GZZ1 169 aaKnown RBP2.92□□□□□ -1.94
PTCD3-216ENST00000487043 C1orf198Q9H425 327 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 AUNIPQ9H7T9 357 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 RPS10P5Q9NQ39 176 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 SLC7A10Q9NS82 523 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms