RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 GOLGA8KD6RF30 607 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 C3orf84H3BNL1 204 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 GOLGA8MH3BSY2 632 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 SLC25A16P16260 332 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 UGT2B7P16662 529 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 OPRM1P35372 400 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 COILP38432 576 aaPredicted RBP2.08□□□□□ -2.08
SMC4-218ENST00000486711 RPL14P50914 215 aaKnown RBP2.08□□□□□ -2.08
SMC4-218ENST00000486711 ZNF117Q03924 483 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 MED21Q13503 144 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 COTL1Q14019 142 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 TMEM176BQ3YBM2 270 aaPredicted RBP2.08□□□□□ -2.08
SMC4-218ENST00000486711 MESTQ5EB52 335 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 ATP5L2Q7Z4Y8 100 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 RIBC1Q8N443 379 aaPredicted RBP2.08□□□□□ -2.08
SMC4-218ENST00000486711 TMEM251Q8N6I4 163 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 OR10D3Q8NH80 312 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 CMTM5Q96DZ9 223 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 STACQ99469 402 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 DHRS9Q9BPW9 319 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 LLPHQ9BRT6 129 aaKnown RBP2.08□□□□□ -2.08
SMC4-218ENST00000486711 TIPINQ9BVW5 301 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 CDCA4Q9BXL8 241 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 TXNL4BQ9NX01 149 aaKnown RBP2.08□□□□□ -2.08
SMC4-218ENST00000486711 ATP6V1DQ9Y5K8 247 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 YLPM1P49750 1951 aaKnown RBP2.08□□□□□ -2.08
SMC4-218ENST00000486711 BRD4O60885 1362 aaPredicted RBP2.08□□□□□ -2.08
SMC4-218ENST00000486711 RIMS2Q9UQ26 1411 aa2.08□□□□□ -2.08
SMC4-218ENST00000486711 TINCRA0A1B0GVN0 87 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 DHRS12A0PJE2 317 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 AZIN1O14977 448 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 SSNA1O43805 119 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 PSMG1O95456 288 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 IGLV3-27P01718 113 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 CD7P09564 240 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 ESDP10768 282 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 MIPP30301 263 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 FUSP35637 526 aaKnown RBP eCLIP2.07□□□□□ -2.08
SMC4-218ENST00000486711 IFNGR2P38484 337 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 CA7P43166 264 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 RWDD2BP57060 319 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 HERVK_113P63121 156 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 HPCAP84074 193 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 TMEM267Q0VDI3 215 aaPredicted RBP2.07□□□□□ -2.08
SMC4-218ENST00000486711 LCN8Q6JVE9 175 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 RASL11AQ6T310 242 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 OR11H1Q8NG94 326 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 SMIM19Q96E16 107 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 MBOAT7Q96N66 472 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 TBX5Q99593 518 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 PLEKHJ1Q9NW61 149 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 NKIRAS1Q9NYS0 192 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 HHLA2Q9UM44 414 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 SNX12Q9UMY4 172 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 C15orf41Q9Y2V0 281 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 HDGFL3Q9Y3E1 203 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 MYO5BQ9ULV0 1848 aa2.07□□□□□ -2.08
SMC4-218ENST00000486711 PLXNB1O43157 2135 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 IGHV3-73A0A0B4J1V6 119 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 TEX50A0A1B0GTY4 177 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 GRIFINA4D1Z8 144 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 BIRC5O15392 142 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 LY6HO94772 140 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 ATP5G1P05496 136 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 CD200P41217 278 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 TAS2R45P59539 299 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 FGF12P61328 243 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 FAM151BQ6UXP7 276 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 FAM19A5Q7Z5A7 132 aaPredicted RBP2.06□□□□□ -2.08
SMC4-218ENST00000486711 OR4C16Q8NGL9 310 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 SLC37A2Q8TED4 501 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 Q8WTZ3 238 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 ZCCHC13Q8WW36 166 aaKnown RBP2.06□□□□□ -2.08
SMC4-218ENST00000486711 ASB13Q8WXK3 278 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 TMBIM1Q969X1 311 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 KCTD7Q96MP8 289 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 GNB1LQ9BYB4 327 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 MS4A6AQ9H2W1 248 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 MMACHCQ9Y4U1 282 aa2.06□□□□□ -2.08
SMC4-218ENST00000486711 UBFD1O14562 309 aaKnown RBP2.05□□□□□ -2.08
SMC4-218ENST00000486711 MRASO14807 208 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 COCHO43405 550 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 GSTZ1O43708 216 aaPredicted RBP2.05□□□□□ -2.08
SMC4-218ENST00000486711 APOEP02649 317 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 LINC00313P59037 77 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 TSPEAR-AS2P59090 65 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 BTN3A2P78410 334 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 MGAT3Q09327 533 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 EBPQ15125 230 aaKnown RBP2.05□□□□□ -2.08
SMC4-218ENST00000486711 ZNF181Q2M3W8 571 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 FAM229BQ4G0N7 80 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 ZNF567Q8N184 647 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 Q8N402 240 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 OR2D3Q8NGH3 330 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.05□□□□□ -2.08
SMC4-218ENST00000486711 UPK3BQ9BT76 320 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 NSRP1Q9H0G5 558 aaKnown RBP2.05□□□□□ -2.08
SMC4-218ENST00000486711 A0A1W2PP64 1363 aa2.05□□□□□ -2.08
SMC4-218ENST00000486711 A0A0J9YX75 114 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 C5orf49A4QMS7 147 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms