RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 Q8N976 141 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR11H1Q8NG94 326 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR10G3Q8NGC4 313 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR52E4Q8NGH9 312 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR10K1Q8NGX5 313 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR11H2Q8NH07 326 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR51Q1Q8NH59 317 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR10A6Q8NH74 314 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 STOML3Q8TAV4 291 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 UBALD1Q8TB05 177 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 ZFAND1Q8TCF1 268 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 PIFOQ8TCI5 191 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 EEF1AKMT1Q8WVE0 214 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 ASB17Q8WXJ9 295 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 ASB13Q8WXK3 278 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 TMEM54Q969K7 222 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 YIPF5Q969M3 257 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 FCRL1Q96LA6 429 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 PGLYRP3Q96LB9 341 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 P2RX4Q99571 388 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 ZNF717Q9BY31 904 aaPredicted RBP1.97□□□□□ -2.09
VPS41-213ENST00000485955 COA1Q9GZY4 146 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 ALX4Q9H161 411 aaPredicted RBP1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR51I1Q9H343 314 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 TXNIPQ9H3M7 391 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 C11orf49Q9H6J7 331 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 BIN3Q9NQY0 253 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 CCL28Q9NRJ3 127 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 ARMC1Q9NVT9 282 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 PRO0628Q9UI54 55 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR52A1Q9UKL2 312 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 RAB22AQ9UL26 194 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 C14orf166Q9Y224 244 aaKnown RBP1.97□□□□□ -2.09
VPS41-213ENST00000485955 LRRK2Q5S007 2527 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 A0A1B0GUL6 1792 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 A0A1W2PP64 1363 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 RALGAPA2Q2PPJ7 1873 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 MGAQ8IWI9 3026 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 PCDH11XQ9BZA7 1347 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 AKAP9Q99996 3911 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 UBR2Q8IWV8 1755 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 ITPR2Q14571 2701 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 LRBAP50851 2863 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 IGHV1OR21-1A0A087WYE8 117 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 TGIF2-C20orf24A0A0A6YYL0 155 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 NCBP2LA6PVI3 153 aaKnown RBP1.96□□□□□ -2.1
VPS41-213ENST00000485955 CEACAM18A8MTB9 384 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 PPP5D1E7EU14 171 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 SOX14O95416 240 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 TTC4O95801 387 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 CRYZL1O95825 349 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 IFNA1P01562 189 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 IGLV3-19P01714 112 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 PGA4P0DJD7 388 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 PGA3P0DJD8 388 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 PGA5P0DJD9 388 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 TDGF1P13385 188 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 BTCP35070 178 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 GCLMP48507 274 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 TDGF1P3P51864 188 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 RND2P52198 227 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 NUTF2P61970 127 aaKnown RBP1.96□□□□□ -2.1
VPS41-213ENST00000485955 SLC35A1P78382 337 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 IFITM2Q01629 132 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 SMAGPQ0VAQ4 97 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 PPP1R1AQ13522 171 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 CLEC12BQ2HXU8 276 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 LRRC75BQ2VPJ9 315 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 PYCR3Q53H96 274 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 ACSBG2Q5FVE4 666 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 TMEM255AQ5JRV8 349 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 KPRPQ5T749 579 aaPredicted RBP1.96□□□□□ -2.1
VPS41-213ENST00000485955 SYT6Q5T7P8 510 aaPredicted RBP1.96□□□□□ -2.1
VPS41-213ENST00000485955 HIST2H3PS2Q5TEC6 136 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 Q5W150 140 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR2T5Q6IEZ7 315 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 TNFAIP8L2Q6P589 184 aaPredicted RBP1.96□□□□□ -2.1
VPS41-213ENST00000485955 CYHR1Q6ZMK1 362 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 RASSF6Q6ZTQ3 369 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 FAM231DQ6ZW35 169 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 MRPL55Q7Z7F7 128 aaKnown RBP1.96□□□□□ -2.1
VPS41-213ENST00000485955 COMMD7Q86VX2 200 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 GAPTQ8N292 157 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 STX19Q8N4C7 294 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 ZADH2Q8N4Q0 377 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 CBR4Q8N4T8 237 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 ZNF676Q8N7Q3 588 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 SLC26A10Q8NG04 563 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR2Z1Q8NG97 314 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR4F15Q8NGB8 312 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR52E2Q8NGJ4 325 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR4C13Q8NGP0 309 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR13D1Q8NGV5 346 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR10R2Q8NGX6 335 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR2T29Q8NH02 315 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR9G1Q8NH87 305 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 OR51E1Q8TCB6 317 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 SLC37A2Q8TED4 501 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 FGF14Q92915 247 aa1.96□□□□□ -2.1
VPS41-213ENST00000485955 CLDN23Q96B33 292 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms