RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 DTYMKP23919 212 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 ALDH3B2P48448 385 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 VBP1P61758 197 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 BLCAPP62952 87 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 EBI3Q14213 229 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 PNLIPRP3Q17RR3 467 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 ZNF260Q3ZCT1 412 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 GPR107Q5VW38 600 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 Q6ZS49 121 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 GPR141Q7Z602 305 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 SLC25A46Q96AG3 418 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 KCTD12Q96CX2 325 aaKnown RBP9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 S100A16Q96FQ6 103 aaKnown RBP9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 DCSTAMPQ9H295 470 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 PIPOXQ9P0Z9 390 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 ZNF230Q9UIE0 474 aaPredicted RBP9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 SIGLEC9Q9Y336 463 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 TRAV18A0A075B6X5 111 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 IGHV3-72A0A0B4J1Y9 119 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 GABARAPO95166 117 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 DIRAS3O95661 229 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 GSTT2P0CG29 244 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 GSTT2BP0CG30 244 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 RORCP51449 518 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 GNG2P59768 71 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 HNF4GQ14541 408 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 ARSJQ5FYB0 599 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 ODF3L1Q8IXM7 274 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR2T10Q8NGZ9 312 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR10J5Q8NHC4 309 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 SLC25A38Q96DW6 304 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 S1PR3Q99500 378 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 ST6GALNAC5Q9BVH7 336 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 ABCG5Q9H222 651 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 ZNF702PQ9H963 129 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 NECAP2Q9NVZ3 263 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR1A1Q9P1Q5 309 aa9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 ELF5Q9UKW6 265 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOA-204ENST00000485901 IGKV1-6A0A0C4DH72 117 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 TMEM235A6NFC5 223 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 BET1O15155 118 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 ST8SIA5O15466 376 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 PEX14O75381 377 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 MOSP00540 346 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 CTXN2P0C2S0 81 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 CTF1Q16619 201 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 ABCA11PQ4W5N1 156 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 UBE2NLQ5JXB2 153 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 FAM71F2Q6NXP2 309 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 ZNF833PQ6ZTB9 187 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 IZUMO1Q8IYV9 350 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR4F17Q8NGA8 305 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 ACOT12Q8WYK0 555 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 EAF1Q96JC9 268 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR4F4Q96R69 305 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 AGMATQ9BSE5 352 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 TOLLIPQ9H0E2 274 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 C11orf54Q9H0W9 315 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 IFI27L2Q9H2X8 130 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 RDH8Q9NYR8 311 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 ZNF221Q9UK13 617 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 MOB4Q9Y3A3 225 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 DNAH3Q8TD57 4116 aa9.54□□□□□ -0.88
HLA-DOA-204ENST00000485901 SAA2-SAA4A0A096LPE2 208 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 TRBV6-7A0A0A0MS04 114 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 FGF16O43320 207 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 XRCC3O43542 346 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 AMY1AP04745 511 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 AMY2AP04746 511 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 SAA2P0DJI9 122 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 VSIG10L2P0DP72 767 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 RPL5P46777 297 aaKnown RBP9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR3A3P47888 321 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 IGSF11Q5DX21 431 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 Q6ZS46 218 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 SAMD12Q8N8I0 201 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR8H1Q8NGG4 311 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 MRAPQ8TCY5 172 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 NUDCD2Q8WVJ2 157 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 MAFIPQ8WZ33 124 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 CMTM3Q96MX0 182 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 GINS4Q9BRT9 223 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 CABLES2Q9BTV7 478 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 NAA50Q9GZZ1 169 aaKnown RBP9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 SERTAD4Q9NUC0 356 aa9.53□□□□□ -0.88
HLA-DOA-204ENST00000485901 SMIM31A0A1B0GVY4 71 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 NCBP2LA6PVI3 153 aaKnown RBP9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 ZNF736B4DX44 427 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 MC5RP33032 325 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 VDAC2P45880 294 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 LSAMPQ13449 338 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 MZT2AQ6P582 158 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 NDUFA11Q86Y39 141 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 Q8N6K4 173 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 KLHDC1Q8N7A1 406 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 C5orf56Q8N8D9 126 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 AP3S1Q92572 193 aa9.52□□□□□ -0.89
HLA-DOA-204ENST00000485901 ABHD14BQ96IU4 210 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms