RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 LHFPL4Q7Z7J7 247 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 MOB3BQ86TA1 216 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 OR5AP2Q8NGF4 316 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 OR5H2Q8NGV7 314 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 CT45A3Q8NHU0 189 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 AJUBAQ96IF1 538 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 ADTRPQ96IZ2 230 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 CABLES2Q9BTV7 478 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 NXF2Q9GZY0 626 aaKnown RBP6.69□□□□□ -1.34
SF3A1-208ENST00000485618 RBM38Q9H0Z9 239 aaKnown RBP6.69□□□□□ -1.34
SF3A1-208ENST00000485618 RDH8Q9NYR8 311 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 C1RLQ9NZP8 487 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF107Q9UII5 783 aaPredicted RBP6.69□□□□□ -1.34
SF3A1-208ENST00000485618 VPREB3Q9UKI3 123 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 OR2W1Q9Y3N9 320 aa6.69□□□□□ -1.34
SF3A1-208ENST00000485618 A0A1B0GUS0 222 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF736B4DX44 427 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-208ENST00000485618 GABARAPH6UMI1 98 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 CTDSPLO15194 276 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 ST8SIA5O15466 376 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 SSX5O60225 188 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 IGHV4-59P01825 116 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 HLA-DQB1P01920 261 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 CD1BP29016 333 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 RAB13P51153 203 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF137PP52743 207 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 AP3S2P59780 193 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 HERV-K104P61576 105 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 FOXL1Q12952 345 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 HES1Q14469 280 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 CDK10Q15131 360 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 IGSF11Q5DX21 431 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 DHRS7BQ6IAN0 325 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-208ENST00000485618 LPCAT3Q6P1A2 487 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 FAM131AQ6UXB0 335 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-208ENST00000485618 OR8H1Q8NGG4 311 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 OR6F1Q8NGZ6 308 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 OR2T10Q8NGZ9 312 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 OR4F5Q8NH21 305 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 GPX8Q8TED1 209 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 RTN4IP1Q8WWV3 396 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF48Q96MX3 618 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-208ENST00000485618 NPFFR1Q9GZQ6 430 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 TOLLIPQ9H0E2 274 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 C11orf54Q9H0W9 315 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-208ENST00000485618 GAB2Q9UQC2 676 aa6.68□□□□□ -1.34
SF3A1-208ENST00000485618 IGHV1-3A0A0C4DH29 117 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 MDFIC2A0A1B0GVS7 189 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 A0A1W2PPE3 182 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 TIMM23O14925 209 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 VENTXO95231 258 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 MOSP00540 346 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 APOA2P02652 100 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 CSF1P09603 554 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 OR8U9P0C7N5 309 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 RRASP10301 218 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 FCGR2CP31995 323 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 TNFSF8P32971 234 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 FAUP35544 74 aaKnown RBP6.67□□□□□ -1.34
SF3A1-208ENST00000485618 INPP1P49441 399 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF134P52741 427 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 TAS2R19P59542 299 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 GNMTQ14749 295 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 MEF2DQ14814 521 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 PYDC2Q56P42 97 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 C11orf88Q6PI97 169 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 LINC00299Q6ZSB3 139 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 LAX1Q8IWV1 398 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 CMTM1Q8IZ96 169 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 H1FOOQ8IZA3 346 aaPredicted RBP6.67□□□□□ -1.34
SF3A1-208ENST00000485618 DRAM1Q8N682 238 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 ZDHHC22Q8N966 263 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 ZBTB34Q8NCN2 500 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF439Q8NDP4 499 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 OR4C13Q8NGP0 309 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 OR8U1Q8NH10 309 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 GIMAP1Q8WWP7 306 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 MAFIPQ8WZ33 124 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 ST6GALNAC6Q969X2 333 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 AIFM2Q9BRQ8 373 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 TNFRSF19Q9NS68 423 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 EHFQ9NZC4 300 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 OR1A1Q9P1Q5 309 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 ELF5Q9UKW6 265 aaPredicted RBP6.67□□□□□ -1.34
SF3A1-208ENST00000485618 TCF19Q9Y242 345 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 PRELID3BQ9Y3B1 194 aa6.67□□□□□ -1.34
SF3A1-208ENST00000485618 IGKV1-6A0A0C4DH72 117 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 FAM181BA6NEQ2 426 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 OR5H14A6NHG9 310 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 A6NHS1 94 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 H7C2Y5 167 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 GPR137BO60478 399 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 TMEM11P17152 192 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 NAT1P18440 290 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 HLA-DMAP28067 261 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 ECI1P42126 302 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 THBS3P49746 956 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 ZNF45Q02386 682 aa6.66□□□□□ -1.34
SF3A1-208ENST00000485618 DYRK1AQ13627 763 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms