RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ABRACLQ9P1F3 81 aa14.89□□□□□ -0.03
COL27A1-205ENST00000485397 A3GALT2U3KPV4 340 aa14.89□□□□□ -0.03
COL27A1-205ENST00000485397 FCN1O00602 326 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 SAP30O75446 220 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 UBBP0CG47 229 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 RPS27AP62979 156 aaKnown RBP14.88□□□□□ -0.03
COL27A1-205ENST00000485397 CX3CL1P78423 397 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 ZNF660Q6AZW8 331 aaPredicted RBP14.88□□□□□ -0.03
COL27A1-205ENST00000485397 LRRTM1Q86UE6 522 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 SBSPONQ8IVN8 264 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 C8orf59Q8N0T1 100 aaPredicted RBP14.88□□□□□ -0.03
COL27A1-205ENST00000485397 SVOPQ8N4V2 548 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 THRSPQ92748 146 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 TOLLIPQ9H0E2 274 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 PIPOXQ9P0Z9 390 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 STEAP1Q9UHE8 339 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 ERGIC3Q9Y282 383 aa14.88□□□□□ -0.03
COL27A1-205ENST00000485397 C3orf84H3BNL1 204 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 EBAG9O00559 213 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 RRHO14718 337 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 EGR2P11161 476 aaPredicted RBP14.87□□□□□ -0.03
COL27A1-205ENST00000485397 SNRPBP14678 240 aaKnown RBP14.87□□□□□ -0.03
COL27A1-205ENST00000485397 CRIP2P52943 208 aaPredicted RBP14.87□□□□□ -0.03
COL27A1-205ENST00000485397 GABPB1Q06547 395 aaPredicted RBP14.87□□□□□ -0.03
COL27A1-205ENST00000485397 C1orf100Q5SVJ3 147 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 GLT8D1Q68CQ7 371 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 FAM71F2Q6NXP2 309 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 ZNF880Q6PDB4 577 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 SETD6Q8TBK2 473 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 ABHD14BQ96IU4 210 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 TMEM59Q9BXS4 323 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 CHMP1AQ9HD42 196 aaPredicted RBP14.87□□□□□ -0.03
COL27A1-205ENST00000485397 C8orf4Q9NR00 106 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 TPSG1Q9NRR2 321 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 PLCXD1Q9NUJ7 323 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 SLC23A1Q9UHI7 598 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 FOXA2Q9Y261 457 aaPredicted RBP14.87□□□□□ -0.03
COL27A1-205ENST00000485397 NUBP2Q9Y5Y2 271 aa14.87□□□□□ -0.03
COL27A1-205ENST00000485397 IGHV4OR15-8A0A075B7B6 117 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 A0A087WW49 117 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 LINC01619G3V211 115 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 RAB29O14966 203 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 NAPSAO96009 420 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 SPNP16150 400 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 UNC119Q13432 240 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 PLGLAQ15195 96 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 RBM48Q5RL73 367 aaKnown RBP14.86□□□□□ -0.03
COL27A1-205ENST00000485397 OVCH2Q7RTZ1 564 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 ABHD5Q8WTS1 349 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 FBLIM1Q8WUP2 373 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 TMED9Q9BVK6 235 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 TM2D1Q9BX74 207 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 FKBP14Q9NWM8 211 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 GAB2Q9UQC2 676 aa14.86□□□□□ -0.03
COL27A1-205ENST00000485397 A0A0A6YYD4 124 aa14.85□□□□□ -0.03
COL27A1-205ENST00000485397 H0YJW9 148 aa14.85□□□□□ -0.03
COL27A1-205ENST00000485397 IGHV3-11P01762 117 aa14.85□□□□□ -0.03
COL27A1-205ENST00000485397 GSTP1P09211 210 aaKnown RBP14.85□□□□□ -0.03
COL27A1-205ENST00000485397 LGALS1P09382 135 aaKnown RBP14.85□□□□□ -0.03
COL27A1-205ENST00000485397 QRFPP83859 136 aa14.85□□□□□ -0.03
COL27A1-205ENST00000485397 KCNG3Q8TAE7 436 aa14.85□□□□□ -0.03
COL27A1-205ENST00000485397 ARPC1AQ92747 370 aa14.85□□□□□ -0.03
COL27A1-205ENST00000485397 CLCC1Q96S66 551 aa14.85□□□□□ -0.03
COL27A1-205ENST00000485397 HDHD3Q9BSH5 251 aaPredicted RBP14.85□□□□□ -0.03
COL27A1-205ENST00000485397 FAM103A1Q9BTL3 118 aaKnown RBP14.85□□□□□ -0.03
COL27A1-205ENST00000485397 STAB2Q8WWQ8 2551 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 OR5H14A6NHG9 310 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 TMEM14DPA8MWL7 114 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 H7C2Y5 167 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 PPP1R27Q86WC6 154 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 MS4A15Q8N5U1 240 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 TCTEX1D1Q8N7M0 179 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 PHYHIPQ92561 330 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 MS4A10Q96PG2 267 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 RCHY1Q96PM5 261 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 AGMATQ9BSE5 352 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 PLEKHJ1Q9NW61 149 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 OR1A1Q9P1Q5 309 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 WASHC3Q9Y3C0 194 aa14.84□□□□□ -0.03
COL27A1-205ENST00000485397 DYNC2H1Q8NCM8 4307 aaKnown RBP14.84□□□□□ -0.03
COL27A1-205ENST00000485397 SLC22A1O15245 554 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 SOCS1O15524 211 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 GP9P14770 177 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 SRMP19623 302 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 MC5RP33032 325 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 TMEM267Q0VDI3 215 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-205ENST00000485397 RCN1Q15293 331 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 ACSM6Q6P461 480 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 CD200R1LQ6Q8B3 271 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 UNQ5815/PRO19632Q6UWF5 114 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 CEACAM19Q7Z692 300 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 OR5AN1Q8NGI8 311 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 C11orf54Q9H0W9 315 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-205ENST00000485397 AK3Q9UIJ7 227 aa14.83□□□□□ -0.04
COL27A1-205ENST00000485397 TRIM64CA6NLI5 447 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 ITGB1BP1O14713 200 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 PROP1O75360 226 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 CDK1P06493 297 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 FRMD6-AS1P0C7T7 363 aa14.82□□□□□ -0.04
COL27A1-205ENST00000485397 CD37P11049 281 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms