RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 CD28P10747 220 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 CD1BP29016 333 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 GNG2P59768 71 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 KIR2DS1Q14954 304 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 LY6G6FQ5SQ64 297 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 OR4A4PQ8NGN8 299 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 PHF21AQ96BD5 680 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 NABP2Q9BQ15 211 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 NAA50Q9GZZ1 169 aaKnown RBP12.9□□□□□ -0.34
DDR1-246ENST00000485023 RDH8Q9NYR8 311 aa12.9□□□□□ -0.34
DDR1-246ENST00000485023 TRAV18A0A075B6X5 111 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 SCGNO76038 276 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 MOSP00540 346 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 EBI3Q14213 229 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 ARL6IP1Q15041 203 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 HACD4Q5VWC8 232 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 GLDNQ6ZMI3 551 aaPredicted RBP12.89□□□□□ -0.35
DDR1-246ENST00000485023 Q8N6K4 173 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 EDARADDQ8WWZ3 215 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 ST6GALNAC5Q9BVH7 336 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 MRPS26Q9BYN8 205 aaKnown RBP12.89□□□□□ -0.35
DDR1-246ENST00000485023 WNT10AQ9GZT5 417 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 PIPOXQ9P0Z9 390 aa12.89□□□□□ -0.35
DDR1-246ENST00000485023 RAB29O14966 203 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 GSTP1P09211 210 aaKnown RBP12.88□□□□□ -0.35
DDR1-246ENST00000485023 SCAND1P57086 179 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 NSUN5P1Q3KNT7 163 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 ZNF260Q3ZCT1 412 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 C10orf99Q6UWK7 81 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 FAM131AQ6UXB0 335 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 TREML4Q6UXN2 200 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 CENPVQ7Z7K6 275 aaPredicted RBP12.88□□□□□ -0.35
DDR1-246ENST00000485023 OR10J5Q8NHC4 309 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 S1PR3Q99500 378 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 ZNF251Q9BRH9 671 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 CABLES2Q9BTV7 478 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.88□□□□□ -0.35
DDR1-246ENST00000485023 LINC00527Q9UJ94 153 aa12.88□□□□□ -0.35
DDR1-246ENST00000485023 FGF16O43320 207 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 SSX5O60225 188 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 FCER2P06734 321 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 PTHLHP12272 177 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 GPR12P47775 334 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 F2RL1P55085 397 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 MMDQ15546 238 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 C2orf68Q2NKX9 166 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 GPR107Q5VW38 600 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 CROCCP3Q8IVE0 287 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 SAMD12Q8N8I0 201 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 Q8N9W7 124 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 DRAXINQ8NBI3 349 aaPredicted RBP12.87□□□□□ -0.35
DDR1-246ENST00000485023 OR5AU1Q8NGC0 362 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 RITA1Q96K30 269 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 NOL4LQ96MY1 436 aaPredicted RBP12.87□□□□□ -0.35
DDR1-246ENST00000485023 CITED2Q99967 270 aaPredicted RBP12.87□□□□□ -0.35
DDR1-246ENST00000485023 GINS4Q9BRT9 223 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 AGMATQ9BSE5 352 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 ZNF221Q9UK13 617 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 SPATA2Q9UM82 520 aa12.87□□□□□ -0.35
DDR1-246ENST00000485023 TRBV6-7A0A0A0MS04 114 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 A0A1W2PRX2 142 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 J3QRK9 145 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 ITGB1BP1O14713 200 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 CSF1P09603 554 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 OR8U9P0C7N5 309 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 DTYMKP23919 212 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 CNTFRP26992 372 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 LINC00205P59089 165 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 ACTBP60709 375 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 SLC35E3Q7Z769 313 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 OR8U1Q8NH10 309 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 FAM110DQ8TAY7 271 aaPredicted RBP12.86□□□□□ -0.35
DDR1-246ENST00000485023 WIPF2Q8TF74 440 aaPredicted RBP12.86□□□□□ -0.35
DDR1-246ENST00000485023 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 OR2D2Q9H210 308 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 PLSCR3Q9NRY6 295 aa12.86□□□□□ -0.35
DDR1-246ENST00000485023 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 H7C2Y5 167 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 CT45A6P0DMU7 189 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 CT45A5P0DMU8 189 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 CT45A7P0DMV0 189 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 PNLIPRP3Q17RR3 467 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 KHDC1LQ5JSQ8 128 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 UBE2NLQ5JXB2 153 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 FAM71F2Q6NXP2 309 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 GPR141Q7Z602 305 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 ZNF329Q86UD4 541 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 RASL11BQ9BPW5 248 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 DIABLOQ9NR28 239 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 LIN7CQ9NUP9 197 aaKnown RBP12.85□□□□□ -0.35
DDR1-246ENST00000485023 COMMD3Q9UBI1 195 aa12.85□□□□□ -0.35
DDR1-246ENST00000485023 RBM7Q9Y580 266 aaKnown RBP12.85□□□□□ -0.35
DDR1-246ENST00000485023 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 MEIS3P1A6NDR6 274 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 M0R1X1 148 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 GABARAPO95166 117 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 PITPNAQ00169 270 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 ANKRD13BQ86YJ7 626 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 GVQW1Q8N7I0 195 aa12.84□□□□□ -0.35
DDR1-246ENST00000485023 HSPB9Q9BQS6 159 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms