RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 C17orf58Q2M2W7 97 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 MORN2Q502X0 79 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 FGFRL1Q8N441 504 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 ITLN2Q8WWU7 325 aaPredicted RBP13.85□□□□□ -0.19
CTSA-207ENST00000484855 ABHD14BQ96IU4 210 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 YPEL2Q96QA6 119 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 SLC25A10Q9UBX3 287 aaPredicted RBP13.85□□□□□ -0.19
CTSA-207ENST00000484855 YLPM1P49750 1951 aaKnown RBP13.85□□□□□ -0.19
CTSA-207ENST00000484855 KBTBD11-OT1A0A1B0GTJ5 212 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 CLEC18AA5D8T8 446 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 E5RGE8 158 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 LOXL3P58215 753 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 RAB14P61106 215 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 CATR1Q13166 79 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 EIF4EBP1Q13541 118 aaPredicted RBP13.85□□□□□ -0.19
CTSA-207ENST00000484855 TCF23Q7RTU1 214 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 CLEC18CQ8NCF0 446 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 RNASE11Q8TAA1 199 aaKnown RBP13.85□□□□□ -0.19
CTSA-207ENST00000484855 SCARB1Q8WTV0 552 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 FAM216AQ8WUB2 273 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 ZC4H2Q9NQZ6 224 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 CLN8Q9UBY8 286 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 NSG2Q9Y328 171 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 POMT1Q9Y6A1 747 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 RPS10-NUDT3A0A1W2PQS6 291 aa13.84□□□□□ -0.19
CTSA-207ENST00000484855 HKR1P10072 659 aa13.84□□□□□ -0.19
CTSA-207ENST00000484855 CLLU1Q5K131 121 aa13.84□□□□□ -0.19
CTSA-207ENST00000484855 BTNL3Q6UXE8 466 aa13.84□□□□□ -0.19
CTSA-207ENST00000484855 AGMATQ9BSE5 352 aa13.84□□□□□ -0.19
CTSA-207ENST00000484855 SDHAF2Q9NX18 166 aa13.84□□□□□ -0.19
CTSA-207ENST00000484855 RCL1Q9Y2P8 373 aaKnown RBP13.84□□□□□ -0.19
CTSA-207ENST00000484855 ACACBO00763 2458 aa13.84□□□□□ -0.19
CTSA-207ENST00000484855 IGKV1-39P01597 117 aa13.83□□□□□ -0.19
CTSA-207ENST00000484855 IGKV1D-39P04432 117 aa13.83□□□□□ -0.19
CTSA-207ENST00000484855 AGAP20933 346 aa13.83□□□□□ -0.19
CTSA-207ENST00000484855 RPL12P30050 165 aaKnown RBP13.83□□□□□ -0.19
CTSA-207ENST00000484855 NKX2-1P43699 371 aaPredicted RBP13.83□□□□□ -0.19
CTSA-207ENST00000484855 PPOXP50336 477 aa13.83□□□□□ -0.19
CTSA-207ENST00000484855 HFEQ30201 348 aa13.83□□□□□ -0.19
CTSA-207ENST00000484855 Q3ZCU0 254 aa13.83□□□□□ -0.19
CTSA-207ENST00000484855 ZNF585BQ52M93 769 aa13.83□□□□□ -0.19
CTSA-207ENST00000484855 PCNPQ8WW12 178 aaKnown RBP13.83□□□□□ -0.19
CTSA-207ENST00000484855 GSX2Q9BZM3 304 aa13.83□□□□□ -0.19
CTSA-207ENST00000484855 USF3Q68DE3 2245 aa13.83□□□□□ -0.2
CTSA-207ENST00000484855 hADV38S2A0JD32 116 aa13.83□□□□□ -0.2
CTSA-207ENST00000484855 ZNF729A6NN14 1252 aaPredicted RBP13.83□□□□□ -0.2
CTSA-207ENST00000484855 EPHA1P21709 976 aa13.83□□□□□ -0.2
CTSA-207ENST00000484855 GPR12P47775 334 aa13.83□□□□□ -0.2
CTSA-207ENST00000484855 AKR1C2P52895 323 aa13.83□□□□□ -0.2
CTSA-207ENST00000484855 RPL30P62888 115 aaKnown RBP13.83□□□□□ -0.2
CTSA-207ENST00000484855 TCTEX1D2Q8WW35 142 aa13.83□□□□□ -0.2
CTSA-207ENST00000484855 PLEKHA2Q9HB19 425 aa13.83□□□□□ -0.2
CTSA-207ENST00000484855 GFOD1Q9NXC2 390 aa13.83□□□□□ -0.2
CTSA-207ENST00000484855 A0A0G2JRQ6 117 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 ZNF66Q6ZN08 573 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 CORO2AQ92828 525 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 LSM10Q969L4 123 aaKnown RBP13.82□□□□□ -0.2
CTSA-207ENST00000484855 GPR146Q96CH1 333 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 ABCA4P78363 2273 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 SPTBN1Q01082 2364 aaKnown RBP13.82□□□□□ -0.2
CTSA-207ENST00000484855 CLDN1O95832 211 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 IGHV3-7P01780 117 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 OR2B11Q5JQS5 317 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 IDI2-AS1Q9NZ38 188 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 LINC00312Q9Y6C7 94 aa13.82□□□□□ -0.2
CTSA-207ENST00000484855 A0A1B0GU03 582 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 TNFRSF13BO14836 293 aaPredicted RBP13.81□□□□□ -0.2
CTSA-207ENST00000484855 NDUFB3O43676 98 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 SLC25A6P12236 298 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 LPAR6P43657 344 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 LRRC10Q5BKY1 277 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 LYPD2Q6UXB3 125 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 DMBX1Q8NFW5 382 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 HSD17B10Q99714 261 aaKnown RBP13.81□□□□□ -0.2
CTSA-207ENST00000484855 RAMP3O60896 148 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 IGKV1-5P01602 117 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 S100A1P23297 94 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 NFYBP25208 207 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 P2RY1P47900 373 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 POLR2GP62487 172 aaKnown RBP eCLIP13.81□□□□□ -0.2
CTSA-207ENST00000484855 RPL31P62899 125 aaKnown RBP13.81□□□□□ -0.2
CTSA-207ENST00000484855 MEF2CQ06413 473 aaPredicted RBP13.81□□□□□ -0.2
CTSA-207ENST00000484855 CXorf66Q5JRM2 361 aaPredicted RBP13.81□□□□□ -0.2
CTSA-207ENST00000484855 TCTEX1D1Q8N7M0 179 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 STOML3Q8TAV4 291 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 ABHD14AQ9BUJ0 271 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 CYTL1Q9NRR1 136 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 C19orf12Q9NSK7 152 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 CBLN4Q9NTU7 201 aa13.81□□□□□ -0.2
CTSA-207ENST00000484855 LINC00862A6NCI5 91 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 FCN3O75636 299 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 NXPH3O95157 252 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 TPT1P13693 172 aaKnown RBP13.8□□□□□ -0.2
CTSA-207ENST00000484855 PVALBP20472 110 aaPredicted RBP13.8□□□□□ -0.2
CTSA-207ENST00000484855 RAB7AP51149 207 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 ZNF134P52741 427 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 ZNF816Q0VGE8 651 aaPredicted RBP13.8□□□□□ -0.2
CTSA-207ENST00000484855 TMEM30BQ3MIR4 351 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 SPAG16Q8N0X2 631 aa13.8□□□□□ -0.2
CTSA-207ENST00000484855 LEAP2Q969E1 77 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms