RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 GAPTQ8N292 157 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 PTH2Q96A98 100 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 S100PBPQ96BU1 408 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 CCDC42Q96M95 316 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 RILPQ96NA2 401 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 OR2M4Q96R27 311 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 TBL1YQ9BQ87 522 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 ING2Q9H160 280 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 BABAM2Q9NXR7 383 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 ENOPH1Q9UHY7 261 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 ENPP4Q9Y6X5 453 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 ZFYVE26Q68DK2 2539 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 ATG2BQ96BY7 2078 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 CEP192Q8TEP8 1941 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 KALRNO60229 2985 aa3.99□□□□□ -1.77
UBR3-210ENST00000484596 F5P12259 2224 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 NUP214P35658 2090 aaPredicted RBP3.98□□□□□ -1.77
UBR3-210ENST00000484596 IGKV6-21A0A0C4DH24 114 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 ISPDA4D126 451 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 TGOLN2O43493 480 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 IGLV3-25P01717 112 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 ORM1P02763 201 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 CBR1P16152 277 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 TGFBR2P37173 567 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 CLDN12P56749 244 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 LINC00315P59091 139 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 CCL7P80098 99 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 PMVKQ15126 192 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 BSXQ3C1V8 233 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 TEX30Q5JUR7 227 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 SYPL2Q5VXT5 272 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 HBMQ6B0K9 141 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 BBS7Q8IWZ6 715 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 LFNGQ8NES3 379 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 OR5B17Q8NGF7 314 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 OR13G1Q8NGZ3 307 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 UBALD1Q8TB05 177 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 LINC01560Q8TB33 94 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 AP3S1Q92572 193 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 INIPQ9NRY2 104 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 OPN4Q9UHM6 478 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 SNX24Q9Y343 169 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 YTHDF2Q9Y5A9 579 aaKnown RBP3.98□□□□□ -1.77
UBR3-210ENST00000484596 V9GYQ6 96 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 SCN1AP35498 2009 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 CNOT1A5YKK6 2376 aaKnown RBP3.98□□□□□ -1.77
UBR3-210ENST00000484596 TMEM131Q92545 1883 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 BAHCC1Q9P281 2608 aa3.98□□□□□ -1.77
UBR3-210ENST00000484596 IGF2RP11717 2491 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 GCN1Q92616 2671 aaKnown RBP3.97□□□□□ -1.77
UBR3-210ENST00000484596 F5H5T6 163 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 F5H768 121 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 M0QZ92 97 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 MPZL2O60487 215 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 IL3RAP26951 378 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 RAB38P57729 211 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 PPP1CAP62136 330 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 GRB2P62993 217 aaKnown RBP3.97□□□□□ -1.77
UBR3-210ENST00000484596 PRKCDQ05655 676 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 AESQ08117 197 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 MLLT11Q13015 90 aaPredicted RBP3.97□□□□□ -1.77
UBR3-210ENST00000484596 EIF4EBP1Q13541 118 aaPredicted RBP3.97□□□□□ -1.77
UBR3-210ENST00000484596 TRAM1Q15629 374 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 GUK1Q16774 197 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 FBXL19-AS1Q494R0 122 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 RBM48Q5RL73 367 aaKnown RBP3.97□□□□□ -1.77
UBR3-210ENST00000484596 SDHAF4Q5VUM1 108 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 UGT2A3Q6UWM9 527 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 DRAM2Q6UX65 266 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 CLEC19AQ6UXS0 136 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 UBALD2Q8IYN6 164 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 OR2AE1Q8NHA4 323 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 PRRT1Q99946 306 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 NXF2Q9GZY0 626 aaKnown RBP3.97□□□□□ -1.77
UBR3-210ENST00000484596 CXCL16Q9H2A7 254 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 PLEKHF2Q9H8W4 249 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 ASCL3Q9NQ33 180 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 DNAJC27Q9NZQ0 273 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 GUCA1BQ9UMX6 200 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 PLXND1Q9Y4D7 1925 aa3.97□□□□□ -1.77
UBR3-210ENST00000484596 IGSF10Q6WRI0 2623 aa3.96□□□□□ -1.77
UBR3-210ENST00000484596 IGHV3-49A0A0A0MS15 119 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.96□□□□□ -1.78
UBR3-210ENST00000484596 BET1O15155 118 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 SHOX2O60902 331 aaPredicted RBP3.96□□□□□ -1.78
UBR3-210ENST00000484596 HLA-DQB1P01920 261 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 CD74P04233 296 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 HMGN1P05114 100 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 CISD3P0C7P0 127 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 ZNF35P13682 527 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 NQO1P15559 274 aaKnown RBP3.96□□□□□ -1.78
UBR3-210ENST00000484596 IL1RNP18510 177 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 RHOAP61586 193 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 RAB31Q13636 194 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 FLOT2Q14254 428 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 TAF1AQ15573 450 aaPredicted RBP3.96□□□□□ -1.78
UBR3-210ENST00000484596 SLC9A3R2Q15599 337 aa3.96□□□□□ -1.78
UBR3-210ENST00000484596 TRIP13Q15645 432 aaPredicted RBP3.96□□□□□ -1.78
UBR3-210ENST00000484596 OR10J3Q5JRS4 329 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms