RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 COX6A1P12074 109 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 CHRNA7P36544 502 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 ERVFC1-1P60608 527 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 IGFBP7Q16270 282 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 RIPPLY2Q5TAB7 128 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 C9orf135Q5VTT2 229 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 TMEM256Q8N2U0 113 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 OR10D3Q8NH80 312 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 PSMF1Q92530 271 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 PRRG4Q9BZD6 226 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 CACNA1EQ15878 2313 aa16.72■□□□□ 0.27
RPUSD3-216ENST00000484134 TRBV6-6A0A0A6YYG2 114 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 C1QTNF9BB2RNN3 333 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 DNPH1O43598 174 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 WNT2P09544 360 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 HOXA6P31267 233 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 CCKARP32238 428 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 ACOT6Q3I5F7 207 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 TMEM14EPQ6UXP3 125 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 PRR18Q8N4B5 295 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 CISD2Q8N5K1 135 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 ANAPC16Q96DE5 110 aa16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 RIMS4Q9H426 269 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 AURKAIP1Q9NWT8 199 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-216ENST00000484134 A0A096LPE4 126 aa16.71■□□□□ 0.26
RPUSD3-216ENST00000484134 A0A1W2PPZ6 126 aa16.71■□□□□ 0.26
RPUSD3-216ENST00000484134 PAGE4O60829 102 aa16.71■□□□□ 0.26
RPUSD3-216ENST00000484134 SCGB1D1O95968 90 aa16.71■□□□□ 0.26
RPUSD3-216ENST00000484134 CNN1P51911 297 aaKnown RBP16.71■□□□□ 0.26
RPUSD3-216ENST00000484134 STRADBQ9C0K7 418 aa16.71■□□□□ 0.26
RPUSD3-216ENST00000484134 TMEM9BQ9NQ34 198 aa16.71■□□□□ 0.26
RPUSD3-216ENST00000484134 FKBP11Q9NYL4 201 aa16.71■□□□□ 0.26
RPUSD3-216ENST00000484134 CTXND1A0A1B0GTU2 59 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 LILRA1O75019 489 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 NGFP01138 241 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 IL3RAP26951 378 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 C1orf194Q5T5A4 169 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 OR10G9Q8NGN4 311 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 OR10G7Q8NGN6 311 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 OR5P3Q8WZ94 311 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 DLL3Q9NYJ7 618 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 TIMM9Q9Y5J7 89 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 USF3Q68DE3 2245 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 C5orf49A4QMS7 147 aa16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 RPL15P61313 204 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 RPS19BP1Q86WX3 136 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-216ENST00000484134 TNRC6AQ8NDV7 1962 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 LY6G6EA0A0G2JKS1 128 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 ZNF503-AS2A6NEH8 195 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 M0R143 59 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 CLDN1O95832 211 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 SRP14P37108 136 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 TDGF1P3P51864 188 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 RPS16P62249 146 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 PMP22Q01453 160 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 U3KQA8 63 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 WDR1O75083 606 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 EGR1P18146 543 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 RAB4AP20338 218 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 WNT5AP41221 380 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 FOXG1P55316 489 aaPredicted RBP16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 FAM78BQ5VT40 261 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 MRPL21Q7Z2W9 205 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 FGFRL1Q8N441 504 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 PCED1AQ9H1Q7 454 aa16.69■□□□□ 0.26
RPUSD3-216ENST00000484134 VPS13AQ96RL7 3174 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 DOCK7Q96N67 2140 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 BTNL3Q6UXE8 466 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 SGCZQ96LD1 299 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 KCNS2Q9ULS6 477 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 KIR2DL5BA0A0G2JN68 375 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 KIR2DL5BA0A0G2JPC4 375 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 TMEM210A6NLX4 147 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 CD33P20138 364 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 ARF1P84077 181 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 TFF3Q07654 80 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 WIPI1Q5MNZ9 446 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 KIR2DL5AQ8N109 375 aa16.68■□□□□ 0.26
RPUSD3-216ENST00000484134 CELSR3Q9NYQ7 3312 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 KLF7O75840 302 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 GCH1P30793 250 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 SRD5A2P31213 254 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 FFAR4Q5NUL3 377 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 NEIL1Q96FI4 390 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 NAGKQ9UJ70 344 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 PIGBOS1A0A0B4J2F0 54 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 RHBDL1O75783 438 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 ZNF25P17030 456 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 BMP5P22003 454 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 MLF1P58340 268 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 MANBALQ9NQG1 85 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 CLN8Q9UBY8 286 aa16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 RBM7Q9Y580 266 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-216ENST00000484134 MED12LQ86YW9 2145 aa16.66■□□□□ 0.26
RPUSD3-216ENST00000484134 DEGS1O15121 323 aa16.66■□□□□ 0.26
RPUSD3-216ENST00000484134 MLNRO43193 412 aa16.66■□□□□ 0.26
RPUSD3-216ENST00000484134 FAM58AQ8N1B3 248 aa16.66■□□□□ 0.26
RPUSD3-216ENST00000484134 OR5A2Q8NGI9 324 aa16.66■□□□□ 0.26
RPUSD3-216ENST00000484134 OR1L1Q8NH94 360 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms