RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, human

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP40-206	ENST00000483546		Q8N2B8	174 aa		12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	OR2T6	Q8NHC8	308 aa		12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	NUDCD2	Q8WVJ2	157 aa		12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	S1PR3	Q99500	378 aa		12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	AGMAT	Q9BSE5	352 aa		12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	PRSS22	Q9GZN4	317 aa		12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	OR1A1	Q9P1Q5	309 aa		12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	RNF114	Q9Y508	228 aa		12.5	□□□□□ -0.41
RPP40-206	ENST00000483546	SAA2-SAA4	A0A096LPE2	208 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	SMIM31	A0A1B0GVY4	71 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	SAA2	P0DJI9	122 aa	Predicted RBP	12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	REG1B	P48304	166 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	HES1	Q14469	280 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	CNIH2	Q6PI25	160 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	SHISA2	Q6UWI4	295 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	OR2T10	Q8NGZ9	312 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	C11orf54	Q9H0W9	315 aa	Predicted RBP	12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	RDH8	Q9NYR8	311 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	COMMD3	Q9UBI1	195 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	ELF5	Q9UKW6	265 aa	Predicted RBP	12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	MOB4	Q9Y3A3	225 aa		12.49	□□□□□ -0.41
RPP40-206	ENST00000483546	BET1	O15155	118 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	ST8SIA5	O15466	376 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	FGF16	O43320	207 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	SSX5	O60225	188 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	TPPP	O94811	219 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	IGKV1D-33	P01593	117 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	IGKV1-33	P01594	117 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	TMEM11	P17152	192 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	CD24	P25063	80 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	IGSF11	Q5DX21	431 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	OR8H1	Q8NGG4	311 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	WFDC12	Q8WWY7	111 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	GINS4	Q9BRT9	223 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	ST6GALNAC5	Q9BVH7	336 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	ANXA10	Q9UJ72	324 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	ZNF221	Q9UK13	617 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	GAB2	Q9UQC2	676 aa		12.48	□□□□□ -0.41
RPP40-206	ENST00000483546	MOS	P00540	346 aa		12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	PROK1	P58294	105 aa		12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	TAS2R20	P59543	309 aa		12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	LSAMP	Q13449	338 aa		12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	HOGA1	Q86XE5	327 aa		12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	MAFIP	Q8WZ33	124 aa		12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	TAF15	Q92804	592 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	ZNF702P	Q9H963	129 aa		12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	CCDC59	Q9P031	241 aa	Known RBP	12.47	□□□□□ -0.41
RPP40-206	ENST00000483546	IGKV1D-8	A0A087WSZ0	117 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	OR5H14	A6NHG9	310 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	EIF4E	P06730	217 aa	Known RBP	12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	SPCS2	Q15005	226 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546		Q8N6K4	173 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	BEST4	Q8NFU0	473 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	C15orf40	Q8WUR7	153 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	ISOC1	Q96CN7	298 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	EAF1	Q96JC9	268 aa	Predicted RBP	12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	NABP2	Q9BQ15	211 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	ZNF251	Q9BRH9	671 aa		12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	PARP12	Q9H0J9	701 aa	Known RBP	12.46	□□□□□ -0.41
RPP40-206	ENST00000483546	TENM1	Q9UKZ4	2725 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546		H3BMQ9	156 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	HPGDS	O60760	199 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	ELK1	P19419	428 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	MC5R	P33032	325 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	PRSS3	P35030	304 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	GPR12	P47775	334 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	OR3A3	P47888	321 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	DYNC2LI1	Q8TCX1	351 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	ABHD14B	Q96IU4	210 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	MRPL20	Q9BYC9	149 aa	Known RBP	12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	SCPEP1	Q9HB40	452 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	IFT46	Q9NQC8	304 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	ADAM30	Q9UKF2	790 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	DNHD1	Q96M86	4753 aa		12.45	□□□□□ -0.42
RPP40-206	ENST00000483546	IGHV3-72	A0A0B4J1Y9	119 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	ZNF701	M0R085	212 aa	Predicted RBP	12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	SULT1C2	O00338	296 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	SLC22A5	O76082	557 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	ARPC4	P59998	168 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	BLCAP	P62952	87 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	C5orf56	Q8N8D9	126 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	NECAP2	Q9NVZ3	263 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	ANAPC10	Q9UM13	185 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	RABL2B	Q9UNT1	228 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	OR2W1	Q9Y3N9	320 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	RBM7	Q9Y580	266 aa	Known RBP	12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	CEPT1	Q9Y6K0	416 aa		12.44	□□□□□ -0.42
RPP40-206	ENST00000483546	FAM25A	B3EWG3	89 aa		12.43	□□□□□ -0.42
RPP40-206	ENST00000483546	FAM25C	B3EWG5	89 aa		12.43	□□□□□ -0.42
RPP40-206	ENST00000483546	FAM25G	B3EWG6	89 aa		12.43	□□□□□ -0.42
RPP40-206	ENST00000483546	RBBP9	O75884	186 aa		12.43	□□□□□ -0.42
RPP40-206	ENST00000483546	HLA-DQB1	P01920	261 aa		12.43	□□□□□ -0.42
RPP40-206	ENST00000483546	AMY1A	P04745	511 aa		12.43	□□□□□ -0.42
RPP40-206	ENST00000483546	AMY2A	P04746	511 aa		12.43	□□□□□ -0.42
RPP40-206	ENST00000483546	OR8U9	P0C7N5	309 aa		12.43	□□□□□ -0.42

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