RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RPL30P62888 115 aaKnown RBP10.99□□□□□ -0.65
CPNE1-225ENST00000483495 CATR1Q13166 79 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 C17orf58Q2M2W7 97 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 EIF5AL1Q6IS14 154 aaKnown RBP10.99□□□□□ -0.65
CPNE1-225ENST00000483495 Q6ZRM9 215 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 RNF141Q8WVD5 230 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 BSCL2Q96G97 398 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-225ENST00000483495 LINC00574Q9H8X3 128 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 SAP30LQ9HAJ7 183 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 LYRM2Q9NU23 88 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-225ENST00000483495 DCAF16Q9NXF7 216 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 CALYQ9NYX4 217 aa10.99□□□□□ -0.65
CPNE1-225ENST00000483495 ARID1AO14497 2285 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 A8MXK9 166 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 LGALS8O00214 317 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 SSSCA1O60232 199 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 GYPAP02724 150 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 FGF2P09038 288 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 ZNF16P17020 682 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-225ENST00000483495 APOBEC3AP31941 199 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-225ENST00000483495 MST1LQ2TV78 715 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 DUX4L9Q6RFH8 374 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-225ENST00000483495 ZCCHC24Q8N2G6 241 aaKnown RBP10.98□□□□□ -0.65
CPNE1-225ENST00000483495 CORO2AQ92828 525 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 PCNX1Q96RV3 2341 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 CCL13Q99616 98 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 HSD17B10Q99714 261 aaKnown RBP10.98□□□□□ -0.65
CPNE1-225ENST00000483495 COA4Q9NYJ1 87 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 PSG11Q9UQ72 335 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 TRAV38-1A0A0B4J264 116 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 KBTBD11-OT1A0A1B0GTJ5 212 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 MEX3AA1L020 520 aaKnown RBP10.98□□□□□ -0.65
CPNE1-225ENST00000483495 DEFB108AA8MXU0 73 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 TMEM178BH3BS89 294 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 TMEM50AO95807 157 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 P0C879 139 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 LPAR6P43657 344 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 BRWD1-AS2P59051 145 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 EWSR1Q01844 656 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPNE1-225ENST00000483495 SWI5Q1ZZU3 235 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 TCF23Q7RTU1 214 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 C1orf87Q8N0U7 546 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 ZNF808Q8N4W9 903 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-225ENST00000483495 DEFB108BQ8NET1 73 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 LINC01560Q8TB33 94 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 NEUROG1Q92886 237 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 SLC25A31Q9H0C2 315 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 MAGT1Q9H0U3 335 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 MS4A5Q9H3V2 200 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 WFDC1Q9HC57 220 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 GNG12Q9UBI6 72 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 CLN8Q9UBY8 286 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 CACNG5Q9UF02 275 aa10.98□□□□□ -0.65
CPNE1-225ENST00000483495 SPTA1P02549 2419 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 TRGV10A0A0A0MS01 117 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 IGSF23A1L1A6 192 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 FAM24AA6NFZ4 105 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 B9A039 149 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 CHST1O43916 411 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 CLDN1O95832 211 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 EPHA1P21709 976 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 GRNP28799 593 aaKnown RBP10.97□□□□□ -0.65
CPNE1-225ENST00000483495 AKR1C2P52895 323 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 PAX9P55771 341 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 NHLH2Q02577 135 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 FGFRL1Q8N441 504 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 TMEM252Q8N6L7 170 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 FAM216BQ8N7L0 139 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 RNASE11Q8TAA1 199 aaKnown RBP10.97□□□□□ -0.65
CPNE1-225ENST00000483495 LRRC46Q96FV0 321 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 SMIM3Q9BZL3 60 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 GAB2Q9UQC2 676 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 MMP24Q9Y5R2 645 aa10.97□□□□□ -0.65
CPNE1-225ENST00000483495 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 TNFRSF13BO14836 293 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-225ENST00000483495 RAMP3O60896 148 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 VAMP2P63027 116 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 BAXQ07812 192 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 TMEM30BQ3MIR4 351 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 CLEC9AQ6UXN8 241 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 ODF3L1Q8IXM7 274 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 TCTEX1D2Q8WW35 142 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 SAT2Q96F10 170 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-225ENST00000483495 RAB40CQ96S21 281 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 GINS3Q9BRX5 216 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 TMEM106BQ9NUM4 274 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 GFOD1Q9NXC2 390 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 LPAR3Q9UBY5 353 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 ZZEF1O43149 2961 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 DSCAMO60469 2012 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 DYSFO75923 2080 aa10.96□□□□□ -0.65
CPNE1-225ENST00000483495 CACNA1DQ01668 2161 aa10.96□□□□□ -0.66
CPNE1-225ENST00000483495 NKX6-3A6NJ46 265 aa10.95□□□□□ -0.66
CPNE1-225ENST00000483495 ZNF729A6NN14 1252 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-225ENST00000483495 C17orf98A8MV24 154 aa10.95□□□□□ -0.66
CPNE1-225ENST00000483495 KRBOX1C9JBD0 128 aa10.95□□□□□ -0.66
CPNE1-225ENST00000483495 FAM90A26D6RGX4 464 aa10.95□□□□□ -0.66
CPNE1-225ENST00000483495 WRBO00258 174 aa10.95□□□□□ -0.66
CPNE1-225ENST00000483495 SIAH2O43255 324 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms