RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 TRAPPC13A5PLN9 417 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 MAP1LC3B2A6NCE7 125 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 IGHV3-11P01762 117 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 S100A7P31151 101 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 INPP1P49441 399 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 CMC4P56277 68 aaPredicted RBP5.07□□□□□ -1.6
RBM39-233ENST00000482563 LYZP61626 148 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 GUSBP11Q6P575 273 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 ZBTB8OSQ8IWT0 167 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 C14orf178Q8N769 122 aaPredicted RBP5.07□□□□□ -1.6
RBM39-233ENST00000482563 TCEAL4Q96EI5 215 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 DERL3Q96Q80 235 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 HDHD3Q9BSH5 251 aaPredicted RBP5.07□□□□□ -1.6
RBM39-233ENST00000482563 C1orf50Q9BV19 199 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 MAP1LC3BQ9GZQ8 125 aa5.07□□□□□ -1.6
RBM39-233ENST00000482563 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 TLX1NBP0CAT3 122 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 C1GALT1C1LP0DN25 315 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 TIMM10P62072 90 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 C15orf56Q8N910 161 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 REEP6Q96HR9 211 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 TMEM147Q9BVK8 224 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 MS4A8Q9BY19 250 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 ZNF492Q9P255 531 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 MIA2Q96PC5 1412 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 VPS37CA5D8V6 355 aaPredicted RBP5.06□□□□□ -1.6
RBM39-233ENST00000482563 KNCNA6PVL3 124 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 H0YJW9 148 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 LY6G6DO95868 133 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 DAPP51397 102 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 MPPED2Q15777 294 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 RNASE13Q5GAN3 156 aaKnown RBP5.06□□□□□ -1.6
RBM39-233ENST00000482563 C9orf129Q5T035 196 aaKnown RBP5.06□□□□□ -1.6
RBM39-233ENST00000482563 ZC2HC1BQ5TFG8 222 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 DCUN1D2Q6PH85 259 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 NR2C2APQ86WQ0 139 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 ZNF664Q8N3J9 261 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 TSPAN32Q96QS1 320 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 MED28Q9H204 178 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 NOX3Q9HBY0 568 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 PLSCR3Q9NRY6 295 aa5.06□□□□□ -1.6
RBM39-233ENST00000482563 ARAP3Q8WWN8 1544 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 IGLV1-50A0A075B6I6 118 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 IGHV5-51A0A0C4DH38 117 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 KLF18A0A0U1RQI7 1052 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 A0A1B0GV50 99 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 OR4C45A6NMZ5 311 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 B4DEV8 164 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 HMGB3O15347 200 aaKnown RBP5.05□□□□□ -1.6
RBM39-233ENST00000482563 SERPINE1P05121 402 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 CPMP14384 443 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 TPI1P60174 286 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 MRPS21P82921 87 aaKnown RBP5.05□□□□□ -1.6
RBM39-233ENST00000482563 TNFAIP6P98066 277 aaPredicted RBP5.05□□□□□ -1.6
RBM39-233ENST00000482563 UMODL1-AS1Q8N2C9 162 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 ZNF439Q8NDP4 499 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 OR5H2Q8NGV7 314 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 DNAJC30Q96LL9 226 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 VGLL1Q99990 258 aa5.05□□□□□ -1.6
RBM39-233ENST00000482563 ZNF331Q9NQX6 463 aaPredicted RBP5.05□□□□□ -1.6
RBM39-233ENST00000482563 DENND4BO75064 1496 aaPredicted RBP5.04□□□□□ -1.6
RBM39-233ENST00000482563 IGHV5-10-1A0A0J9YXX1 117 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 LTAP01374 205 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 GABARAPL2P60520 117 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 C12orf74Q32Q52 190 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 LAIR2Q6ISS4 152 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 C1orf174Q8IYL3 243 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 CT55Q8WUE5 264 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 GALMQ96C23 342 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 TAC3Q9UHF0 121 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 DCCP43146 1447 aa5.04□□□□□ -1.6
RBM39-233ENST00000482563 HECW1Q76N89 1606 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 HLA-DRB1P01911 266 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 TFPTP0C1Z6 253 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 OR10J4P0C629 311 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 S100A2P29034 98 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 DEFA3P59666 94 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 CLVS1Q8IUQ0 354 aaPredicted RBP5.03□□□□□ -1.6
RBM39-233ENST00000482563 LRRC18Q8N456 261 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 ANKRD29Q8N6D5 301 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 ZDHHC22Q8N966 263 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 GDPD1Q8N9F7 314 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 TYMSOSQ8TAI1 123 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 MAL2Q969L2 176 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 PYURFQ96I23 114 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 SH3BGRL3Q9H299 93 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 CXorf21Q9HAI6 301 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 TMEM138Q9NPI0 162 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 LYRM2Q9NU23 88 aaPredicted RBP5.03□□□□□ -1.6
RBM39-233ENST00000482563 RPS6KB2Q9UBS0 482 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 SLC23A2Q9UGH3 650 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 ZNF230Q9UIE0 474 aaPredicted RBP5.03□□□□□ -1.6
RBM39-233ENST00000482563 GPATCH8Q9UKJ3 1502 aaKnown RBP5.03□□□□□ -1.6
RBM39-233ENST00000482563 THSD7AQ9UPZ6 1657 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 IGHV1-45A0A0A0MS14 117 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 DEDDO75618 318 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 OR56A5P0C7T3 313 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 CNTFRP26992 372 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 PHBP35232 272 aa5.03□□□□□ -1.6
RBM39-233ENST00000482563 UBE2AP49459 152 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms