RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 TMEM14EPQ6UXP3 125 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 NUFIP2Q7Z417 695 aaKnown RBP13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 DEFB119Q8N690 84 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 ZNF114Q8NC26 417 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 SPACA9Q96E40 222 aaPredicted RBP13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 STRADBQ9C0K7 418 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 TRIOO75962 3097 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 HS3ST1O14792 307 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 TCF21O43680 179 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 MPLP40238 635 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 YPEL3P61236 119 aaPredicted RBP13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 FGF12P61328 243 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 HLA-CQ95604 372 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 TMEM38BQ9NVV0 291 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 CHCHD2Q9Y6H1 151 aaPredicted RBP13.17□□□□□ -0.3
CNKSR1-207ENST00000482227 C11orf94C9JXX5 98 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 TNFSF11O14788 317 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 ZFAND5O76080 213 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 S100GP29377 79 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 GNB1P62873 340 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 PMP22Q01453 160 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 TMEM183BQ1AE95 376 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 NEK7Q8TDX7 302 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 HSPB9Q9BQS6 159 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 DERL1Q9BUN8 251 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 WNT5BQ9H1J7 359 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 PGPEP1LA6NFU8 196 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 RBFOX2O43251 390 aaKnown RBP eCLIP13.16□□□□□ -0.31e-9■■■■■ 33.1
CNKSR1-207ENST00000482227 SELENOTP62341 195 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 SGMS2Q8NHU3 365 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 VN1R17PQ8TDU5 208 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 OR5P3Q8WZ94 311 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 MTCH1Q9NZJ7 389 aa13.16□□□□□ -0.3
CNKSR1-207ENST00000482227 TMPRSS2O15393 492 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 CRYAAP02489 173 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 ESDP10768 282 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 LHX2P50458 406 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 PAFAH1B2P68402 229 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 COL5A1-AS1Q5SY13 56 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 C11orf42Q8N5U0 333 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 CLDN23Q96B33 292 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 TECTBQ96PL2 329 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 VAMP8Q9BV40 100 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 PCED1AQ9H1Q7 454 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 LMO7DNF2Z398 122 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 MYF5P13349 255 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 EPHA8P29322 1005 aaPredicted RBP13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 RAB7AP51149 207 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 TPPP2P59282 170 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 FFAR4Q5NUL3 377 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 PLXDC1Q8IUK5 500 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 OR2H1Q9GZK4 316 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 OR1A1Q9P1Q5 309 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 RNF114Q9Y508 228 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 PPIAL4AQ9Y536 164 aa13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 ASCC3Q8N3C0 2202 aaKnown RBP13.15□□□□□ -0.3
CNKSR1-207ENST00000482227 PIGBOS1A0A0B4J2F0 54 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 SERF1AO75920 110 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 RANP62826 216 aaKnown RBP13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 ALKBH3Q96Q83 286 aaPredicted RBP13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 SRXN1Q9BYN0 137 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 MSL2Q9HCI7 577 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 TMEM9BQ9NQ34 198 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 CLEC1BQ9P126 229 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 PPP1R3CQ9UQK1 317 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 A0A0J9YW62 118 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 A0A1W2PR77 199 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 TIAF1O95411 115 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 MLF1P58340 268 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 TFF3Q07654 80 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 AGBL5Q8NDL9 886 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 SPSB4Q96A44 273 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 BTF3L4Q96K17 158 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 ZDHHC11Q9H8X9 412 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 PATZ1Q9HBE1 687 aaKnown RBP13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 CD207Q9UJ71 328 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
CNKSR1-207ENST00000482227 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 NDUFB4O95168 129 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 NDUFB8O95169 186 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 CLDN1O95832 211 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 BMP5P22003 454 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 CHRNB4P30926 498 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 GPM6AP51674 278 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 RAET1LQ5VY80 246 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 OR1L1Q8NH94 360 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 SFRP2Q96HF1 295 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 LNP1A1A4G5 178 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 F2Z2F3 143 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 C3orf80F5H4A9 247 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 ZIC3O60481 467 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 ATP5G3P48201 142 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 RBX1P62877 108 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 Q6ZS52 159 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 SLC35E1Q96K37 410 aa13.13□□□□□ -0.31
CNKSR1-207ENST00000482227 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms