RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TMEM212A6NML5 194 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 ZNF780AO75290 641 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-224ENST00000481929 GTF2F2P13984 249 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 ATF4P18848 351 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-224ENST00000481929 MC5RP33032 325 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 HTD2P86397 168 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 PSG5Q15238 335 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 GLDNQ6ZMI3 551 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-224ENST00000481929 WFDC3Q8IUB2 231 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 OR8J1Q8NGP2 316 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 PHLDA1Q8WV24 401 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-224ENST00000481929 RNF5Q99942 180 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 TINAGL1Q9GZM7 467 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-224ENST00000481929 RIBC2Q9H4K1 309 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 WASHC3Q9Y3C0 194 aa11.21□□□□□ -0.61
HDAC6-224ENST00000481929 A0A1W2PP11 408 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 H0YJW9 148 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 CA11O75493 328 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 DCTN3O75935 186 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 MAS1P04201 325 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 CT45A6P0DMU7 189 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 CT45A5P0DMU8 189 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 CT45A7P0DMV0 189 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 BMI1P35226 326 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 ZNF93P35789 620 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-224ENST00000481929 DEFB114Q30KQ6 69 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 SLC22A6Q4U2R8 563 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 LY6G6FQ5SQ64 297 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 C6orf141Q5SZD1 244 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 RAB12Q6IQ22 244 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 ZNF554Q86TJ5 538 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 SPATA24Q86W54 205 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 TMEM217Q8N7C4 229 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 OR5AK2Q8NH90 309 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-224ENST00000481929 MRPL48Q96GC5 212 aaKnown RBP11.2□□□□□ -0.62
HDAC6-224ENST00000481929 USMG5Q96IX5 58 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 PDCD1LG2Q9BQ51 273 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 IFI27L2Q9H2X8 130 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 ZC4H2Q9NQZ6 224 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 MBNL3Q9NUK0 354 aaKnown RBP11.2□□□□□ -0.62
HDAC6-224ENST00000481929 PIPOXQ9P0Z9 390 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 TP53TG1Q9Y2A0 90 aa11.2□□□□□ -0.62
HDAC6-224ENST00000481929 RAB29O14966 203 aa11.19□□□□□ -0.62
HDAC6-224ENST00000481929 SPDEFO95238 335 aa11.19□□□□□ -0.62
HDAC6-224ENST00000481929 LGALS7P47929 136 aa11.19□□□□□ -0.62
HDAC6-224ENST00000481929 SOX2P48431 317 aa11.19□□□□□ -0.62
HDAC6-224ENST00000481929 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
HDAC6-224ENST00000481929 DDI2Q5TDH0 399 aa11.19□□□□□ -0.62
HDAC6-224ENST00000481929 TSNAXQ99598 290 aaKnown RBP11.19□□□□□ -0.62
HDAC6-224ENST00000481929 PEX16Q9Y5Y5 336 aa11.19□□□□□ -0.62
HDAC6-224ENST00000481929 J3QRE1 110 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 ST8SIA5O15466 376 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 SPRY2O43597 315 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 PRR20EP86478 221 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 PRR20CP86479 221 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 PRR20DP86480 221 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 PRR20BP86481 221 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 PRR20AP86496 221 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 KDM4DQ6B0I6 523 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 DMKNQ6E0U4 476 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-224ENST00000481929 C5orf24Q7Z6I8 188 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 ACBD7Q8N6N7 88 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 GALMQ96C23 342 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 TMEM68Q96MH6 324 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 PARP12Q9H0J9 701 aaKnown RBP11.18□□□□□ -0.62
HDAC6-224ENST00000481929 TMEM138Q9NPI0 162 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 COA4Q9NYJ1 87 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 TECRQ9NZ01 308 aaKnown RBP11.18□□□□□ -0.62
HDAC6-224ENST00000481929 STEAP1Q9UHE8 339 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 ARL2BPQ9Y2Y0 163 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 GMPPBQ9Y5P6 360 aa11.18□□□□□ -0.62
HDAC6-224ENST00000481929 PKHD1P08F94 4074 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 BMPR1BO00238 502 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 SC5DO75845 299 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 CD2P06729 351 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 KIR2DS2P43631 304 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 PPP3R1P63098 170 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 GPR176Q14439 515 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 HSP90B2PQ58FF3 399 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 Q6ZWC4 215 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 NSL1Q96IY1 281 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 MYCBPQ99417 103 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-224ENST00000481929 DNAH6Q9C0G6 4158 aa11.17□□□□□ -0.62
HDAC6-224ENST00000481929 VPS13DQ5THJ4 4388 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 UBE2QL1A1L167 161 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 C2orf70A6NJV1 201 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 G3V2T6 193 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 FOLR2P14207 255 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 CPEP16870 476 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 RPS16P62249 146 aaKnown RBP11.16□□□□□ -0.62
HDAC6-224ENST00000481929 DEFB135Q30KP9 77 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 OR52B4Q8NGK2 314 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 ALG8Q9BVK2 526 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 LRRC42Q9Y546 428 aa11.16□□□□□ -0.62
HDAC6-224ENST00000481929 H3BNX3 289 aa11.15□□□□□ -0.62
HDAC6-224ENST00000481929 GPX5O75715 221 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms